Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 ADGRV1-202ENST00000425867 8141 ntTSL 57.17□□□□□ -1.262e-8■□□□□ 9.9
SMNDC1O75940 ADGRV1-217ENST00000639431 611 ntTSL 55.74□□□□□ -1.492e-8■□□□□ 9.9
SMNDC1O75940 ADGRV1-234ENST00000640464 4505 ntTSL 55.33□□□□□ -1.562e-8■□□□□ 9.9
SMNDC1O75940 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.812e-8■□□□□ 9.9
SMNDC1O75940 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.41e-7■□□□□ 9.9
SMNDC1O75940 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.321e-7■□□□□ 9.9
SMNDC1O75940 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.111e-7■□□□□ 9.9
SMNDC1O75940 LENG8-203ENST00000421200 594 ntTSL 314.35□□□□□ -0.111e-7■□□□□ 9.9
SMNDC1O75940 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.231e-7■□□□□ 9.9
SMNDC1O75940 SREBF1-208ENST00000469356 1323 ntTSL 320.39■□□□□ 0.852e-12■□□□□ 9.8
SMNDC1O75940 SREBF1-209ENST00000470247 374 ntTSL 59.88□□□□□ -0.832e-12■□□□□ 9.8
SMNDC1O75940 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.792e-6■□□□□ 9.8
SMNDC1O75940 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.84■□□□□ 0.292e-6■□□□□ 9.8
SMNDC1O75940 IRAK1-209ENST00000444254 783 ntTSL 515.54■□□□□ 0.082e-10■□□□□ 9.8
SMNDC1O75940 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.032e-6■□□□□ 9.8
SMNDC1O75940 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.25■□□□□ 0.032e-6■□□□□ 9.8
SMNDC1O75940 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.32□□□□□ -0.122e-6■□□□□ 9.8
SMNDC1O75940 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.182e-6■□□□□ 9.8
SMNDC1O75940 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.56□□□□□ -0.242e-6■□□□□ 9.8
SMNDC1O75940 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.362e-6■□□□□ 9.8
SMNDC1O75940 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC7.6□□□□□ -1.192e-6■□□□□ 9.8
SMNDC1O75940 SNORA49-201ENST00000386157 136 ntBASIC0.81□□□□□ -2.283e-15■□□□□ 9.8
SMNDC1O75940 FTCD-210ENST00000488577 447 ntTSL 317.44■□□□□ 0.382e-6■□□□□ 9.8
SMNDC1O75940 FASN-210ENST00000636968 100 ntTSL 515.07■□□□□ 07e-12■□□□□ 9.8
SMNDC1O75940 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.121e-6■□□□□ 9.8
SMNDC1O75940 GOLGA2-208ENST00000486411 591 ntTSL 317.38■□□□□ 0.374e-9■□□□□ 9.8
SMNDC1O75940 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.68□□□□□ -0.064e-9■□□□□ 9.8
SMNDC1O75940 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.364e-9■□□□□ 9.8
SMNDC1O75940 GOLGA2-205ENST00000462089 766 ntTSL 310.32□□□□□ -0.764e-9■□□□□ 9.8
SMNDC1O75940 GLUL-212ENST00000491322 6132 ntTSL 1 (best)9.58□□□□□ -0.884e-9■□□□□ 9.8
SMNDC1O75940 GLUL-208ENST00000475808 868 ntTSL 27.99□□□□□ -1.134e-9■□□□□ 9.8
SMNDC1O75940 ATP5B-202ENST00000547250 840 ntTSL 58.33□□□□□ -1.081e-12■□□□□ 9.8
SMNDC1O75940 U2SURP-212ENST00000488587 866 ntTSL 38.06□□□□□ -1.127e-14■□□□□ 9.8
SMNDC1O75940 U2SURP-206ENST00000470400 881 ntTSL 37.41□□□□□ -1.227e-14■□□□□ 9.8
SMNDC1O75940 U2SURP-201ENST00000461591 1580 ntTSL 27.14□□□□□ -1.277e-14■□□□□ 9.8
SMNDC1O75940 PABPC4-218ENST00000513632 738 ntTSL 28.24□□□□□ -1.091e-323■□□□□ 9.8
SMNDC1O75940 SNORA55-201ENST00000364587 135 ntBASIC8.04□□□□□ -1.121e-323■□□□□ 9.8
SMNDC1O75940 PABPC4-220ENST00000525669 582 ntTSL 28.02□□□□□ -1.131e-323■□□□□ 9.8
SMNDC1O75940 PABPC4-210ENST00000470443 1212 ntTSL 56.97□□□□□ -1.291e-323■□□□□ 9.8
SMNDC1O75940 ATP2A2-203ENST00000377685 5702 ntTSL 522.35■■□□□ 1.173e-23■□□□□ 9.8
SMNDC1O75940 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.593e-23■□□□□ 9.8
SMNDC1O75940 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.183e-23■□□□□ 9.8
SMNDC1O75940 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC11.34□□□□□ -0.593e-23■□□□□ 9.8
SMNDC1O75940 ATP2A2-207ENST00000548169 2951 ntTSL 28.16□□□□□ -1.13e-23■□□□□ 9.8
SMNDC1O75940 C14orf159-221ENST00000521334 909 ntTSL 317.1■□□□□ 0.338e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC13.71□□□□□ -0.218e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-230ENST00000523837 2814 ntTSL 512□□□□□ -0.498e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-223ENST00000522322 2856 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.58e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-204ENST00000428926 2538 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.538e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-225ENST00000522837 558 ntTSL 411.74□□□□□ -0.538e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-217ENST00000520328 2687 ntTSL 2 BASIC11.6□□□□□ -0.558e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-201ENST00000256324 2967 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.588e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-229ENST00000523816 2764 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.588e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.598e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-218ENST00000521064 544 ntTSL 411.14□□□□□ -0.638e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-211ENST00000518868 3075 ntAPPRIS ALT1 TSL 2 BASIC10.98□□□□□ -0.658e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-222ENST00000522170 853 ntTSL 310.67□□□□□ -0.78e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-214ENST00000519950 1060 ntTSL 310.65□□□□□ -0.78e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-232ENST00000523894 862 ntTSL 1 (best)10.65□□□□□ -0.78e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-215ENST00000519994 1148 ntTSL 1 (best)10.27□□□□□ -0.778e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-206ENST00000517362 583 ntTSL 49.96□□□□□ -0.828e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-207ENST00000517518 1597 ntTSL 1 (best)9.95□□□□□ -0.828e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC9.67□□□□□ -0.868e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-212ENST00000518871 484 ntTSL 49.67□□□□□ -0.868e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-231ENST00000523879 650 ntTSL 59.67□□□□□ -0.868e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-233ENST00000524232 550 ntTSL 27.13□□□□□ -1.278e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.61□□□□□ -1.358e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-220ENST00000521081 622 ntTSL 26.11□□□□□ -1.438e-60■□□□□ 9.8
SMNDC1O75940 C14orf159-209ENST00000518649 555 ntTSL 45.3□□□□□ -1.568e-60■□□□□ 9.8
SMNDC1O75940 SNORA11B-201ENST00000408175 129 ntBASIC4.9□□□□□ -1.638e-60■□□□□ 9.8
SMNDC1O75940 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.511e-6■□□□□ 9.8
SMNDC1O75940 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.391e-6■□□□□ 9.8
SMNDC1O75940 FKBP10-203ENST00000455106 1965 ntTSL 214.55□□□□□ -0.081e-7■□□□□ 9.7
SMNDC1O75940 KMT5B-207ENST00000427752 2475 ntTSL 223.19■■□□□ 1.31e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.46■□□□□ 0.871e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.43■□□□□ 0.71e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.671e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.63■□□□□ 0.571e-6■□□□□ 9.7
SMNDC1O75940 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.2■□□□□ 0.341e-6■□□□□ 9.7
SMNDC1O75940 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.231e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.97■□□□□ 0.151e-6■□□□□ 9.7
SMNDC1O75940 OAZ1-206ENST00000589739 657 ntTSL 215.78■□□□□ 0.121e-6■□□□□ 9.7
SMNDC1O75940 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.55□□□□□ -0.241e-6■□□□□ 9.7
SMNDC1O75940 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.741e-6■□□□□ 9.7
SMNDC1O75940 MARF1-214ENST00000552553 5053 ntTSL 510.28□□□□□ -0.761e-6■□□□□ 9.7
SMNDC1O75940 MARF1-215ENST00000552771 4157 ntTSL 29.95□□□□□ -0.821e-6■□□□□ 9.7
SMNDC1O75940 PRPF40A-206ENST00000471167 333 ntTSL 29.74□□□□□ -0.851e-6■□□□□ 9.7
SMNDC1O75940 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.861e-6■□□□□ 9.7
SMNDC1O75940 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC9.43□□□□□ -0.91e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-209ENST00000441488 2816 ntTSL 1 (best)9.31□□□□□ -0.921e-6■□□□□ 9.7
SMNDC1O75940 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.021e-6■□□□□ 9.7
SMNDC1O75940 MARF1-208ENST00000549337 568 ntTSL 48.26□□□□□ -1.091e-6■□□□□ 9.7
SMNDC1O75940 PRPF40A-207ENST00000471701 293 ntTSL 27.15□□□□□ -1.261e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-202ENST00000323599 653 ntTSL 36.05□□□□□ -1.441e-6■□□□□ 9.7
SMNDC1O75940 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.441e-6■□□□□ 9.7
SMNDC1O75940 CHRD-203ENST00000356534 1252 ntTSL 1 (best)18.27■□□□□ 0.522e-6■□□□□ 9.7
SMNDC1O75940 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.462e-6■□□□□ 9.7
SMNDC1O75940 CHRD-208ENST00000460627 4719 ntTSL 217.41■□□□□ 0.382e-6■□□□□ 9.7
SMNDC1O75940 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.272e-6■□□□□ 9.7
SMNDC1O75940 CHRD-205ENST00000448472 3547 ntTSL 1 (best)16.74■□□□□ 0.272e-6■□□□□ 9.7
Retrieved 100 of 11,362 protein–RNA pairs in 111 ms