Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.4■□□□□ 0.22
UPK1BO75841 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UPK1BO75841 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 CDV3P1-201ENST00000471403 739 ntBASIC16.4■□□□□ 0.22
UPK1BO75841 UNC93B8-201ENST00000511903 705 ntBASIC16.4■□□□□ 0.22
UPK1BO75841 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UPK1BO75841 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.4■□□□□ 0.22
UPK1BO75841 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.4■□□□□ 0.22
UPK1BO75841 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
UPK1BO75841 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 KRT87P-202ENST00000534226 1464 ntBASIC16.4■□□□□ 0.22
UPK1BO75841 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UPK1BO75841 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.4■□□□□ 0.22
UPK1BO75841 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.4■□□□□ 0.22
UPK1BO75841 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.39■□□□□ 0.21
UPK1BO75841 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 AC010141.2-201ENST00000452426 721 ntBASIC16.39■□□□□ 0.21
UPK1BO75841 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 SLC7A5P2-201ENST00000553010 536 ntBASIC16.39■□□□□ 0.21
UPK1BO75841 PCDHB19P-201ENST00000570871 2371 ntBASIC16.39■□□□□ 0.21
UPK1BO75841 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.39■□□□□ 0.21
UPK1BO75841 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UPK1BO75841 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UPK1BO75841 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.38■□□□□ 0.21
UPK1BO75841 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.38■□□□□ 0.21
UPK1BO75841 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.38■□□□□ 0.21
UPK1BO75841 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
UPK1BO75841 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UPK1BO75841 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 LINC00602-201ENST00000629776 2065 ntBASIC16.38■□□□□ 0.21
UPK1BO75841 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.38■□□□□ 0.21
UPK1BO75841 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UPK1BO75841 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.38■□□□□ 0.21
UPK1BO75841 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
UPK1BO75841 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.38■□□□□ 0.21
UPK1BO75841 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.38■□□□□ 0.21
UPK1BO75841 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.38■□□□□ 0.21
UPK1BO75841 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UPK1BO75841 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
UPK1BO75841 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UPK1BO75841 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK1BO75841 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
UPK1BO75841 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
UPK1BO75841 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 RBM17P2-201ENST00000616397 1405 ntBASIC16.37■□□□□ 0.21
UPK1BO75841 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
UPK1BO75841 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
UPK1BO75841 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
UPK1BO75841 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.37■□□□□ 0.21
UPK1BO75841 AC126544.1-201ENST00000580842 1059 ntBASIC16.37■□□□□ 0.21
UPK1BO75841 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 REXO1L9P-201ENST00000604264 2108 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms