Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 KRT8P7-201ENST00000533003 1432 ntBASIC21.12■□□□□ 0.97
MSCO60682 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MSCO60682 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MSCO60682 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSCO60682 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
MSCO60682 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSCO60682 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSCO60682 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.12■□□□□ 0.97
MSCO60682 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.12■□□□□ 0.97
MSCO60682 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.12■□□□□ 0.97
MSCO60682 RNF126P1-202ENST00000569893 925 ntBASIC21.12■□□□□ 0.97
MSCO60682 SLC25A6P4-201ENST00000586535 553 ntBASIC21.12■□□□□ 0.97
MSCO60682 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSCO60682 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.12■□□□□ 0.97
MSCO60682 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.12■□□□□ 0.97
MSCO60682 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSCO60682 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MSCO60682 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MSCO60682 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.11■□□□□ 0.97
MSCO60682 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.11■□□□□ 0.97
MSCO60682 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.11■□□□□ 0.97
MSCO60682 AL121912.1-201ENST00000603683 238 ntBASIC21.11■□□□□ 0.97
MSCO60682 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.11■□□□□ 0.97
MSCO60682 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
MSCO60682 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.11■□□□□ 0.97
MSCO60682 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.11■□□□□ 0.97
MSCO60682 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.11■□□□□ 0.97
MSCO60682 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.11■□□□□ 0.97
MSCO60682 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSCO60682 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.11■□□□□ 0.97
MSCO60682 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.1■□□□□ 0.97
MSCO60682 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 AP000593.1-201ENST00000393668 712 ntBASIC21.1■□□□□ 0.97
MSCO60682 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.1■□□□□ 0.97
MSCO60682 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.1■□□□□ 0.97
MSCO60682 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.1■□□□□ 0.97
MSCO60682 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MSCO60682 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 SDHAP1-207ENST00000440850 2000 ntBASIC21.1■□□□□ 0.97
MSCO60682 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 AL158211.5-201ENST00000623583 2518 ntBASIC21.1■□□□□ 0.97
MSCO60682 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSCO60682 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.09■□□□□ 0.97
MSCO60682 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
MSCO60682 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.09■□□□□ 0.97
MSCO60682 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MSCO60682 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.09■□□□□ 0.97
MSCO60682 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
MSCO60682 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.09■□□□□ 0.97
MSCO60682 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.09■□□□□ 0.97
MSCO60682 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MSCO60682 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSCO60682 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms