Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SSX4O60224 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSX4O60224 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SSX4O60224 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSX4O60224 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
SSX4O60224 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SSX4O60224 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SSX4O60224 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.03■□□□□ 0.32
SSX4O60224 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.03■□□□□ 0.32
SSX4O60224 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.03■□□□□ 0.32
SSX4O60224 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSX4O60224 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX4O60224 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.03■□□□□ 0.32
SSX4O60224 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX4O60224 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SSX4O60224 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.02■□□□□ 0.32
SSX4O60224 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
SSX4O60224 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.02■□□□□ 0.32
SSX4O60224 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SSX4O60224 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SSX4O60224 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.02■□□□□ 0.32
SSX4O60224 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SSX4O60224 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.02■□□□□ 0.32
SSX4O60224 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.02■□□□□ 0.32
SSX4O60224 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.02■□□□□ 0.32
SSX4O60224 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.02■□□□□ 0.32
SSX4O60224 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.02■□□□□ 0.32
SSX4O60224 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SSX4O60224 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SSX4O60224 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX4O60224 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX4O60224 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SSX4O60224 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX4O60224 PRORSD1P-202ENST00000563365 2154 ntBASIC17.02■□□□□ 0.31
SSX4O60224 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.02■□□□□ 0.31
SSX4O60224 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.02■□□□□ 0.31
SSX4O60224 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX4O60224 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX4O60224 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX4O60224 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX4O60224 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX4O60224 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX4O60224 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX4O60224 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.01■□□□□ 0.31
SSX4O60224 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SSX4O60224 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.01■□□□□ 0.31
SSX4O60224 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX4O60224 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX4O60224 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX4O60224 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.01■□□□□ 0.31
SSX4O60224 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX4O60224 MIR4785-201ENST00000585005 73 ntBASIC17.01■□□□□ 0.31
SSX4O60224 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SSX4O60224 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SSX4O60224 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX4O60224 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX4O60224 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX4O60224 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17■□□□□ 0.31
SSX4O60224 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SSX4O60224 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSX4O60224 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17■□□□□ 0.31
SSX4O60224 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
SSX4O60224 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17■□□□□ 0.31
SSX4O60224 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17■□□□□ 0.31
SSX4O60224 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SSX4O60224 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 PCDHA12-202ENST00000613593 2588 ntBASIC17■□□□□ 0.31
SSX4O60224 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SSX4O60224 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms