Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.89■□□□□ 0.45
PDLIM1O00151 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.89■□□□□ 0.45
PDLIM1O00151 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.89■□□□□ 0.45
PDLIM1O00151 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.89■□□□□ 0.45
PDLIM1O00151 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.89■□□□□ 0.45
PDLIM1O00151 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.89■□□□□ 0.45
PDLIM1O00151 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PDLIM1O00151 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PDLIM1O00151 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 KRT18P6-201ENST00000555540 1265 ntBASIC17.88■□□□□ 0.45
PDLIM1O00151 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.88■□□□□ 0.45
PDLIM1O00151 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDLIM1O00151 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDLIM1O00151 SDHAP1-207ENST00000440850 2000 ntBASIC17.88■□□□□ 0.45
PDLIM1O00151 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM1O00151 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 ANO7L1-203ENST00000602586 1720 ntBASIC17.87■□□□□ 0.45
PDLIM1O00151 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM1O00151 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM1O00151 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.87■□□□□ 0.45
PDLIM1O00151 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM1O00151 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM1O00151 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM1O00151 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM1O00151 C2orf69P4-201ENST00000565394 541 ntBASIC17.87■□□□□ 0.45
PDLIM1O00151 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.87■□□□□ 0.45
PDLIM1O00151 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.87■□□□□ 0.45
PDLIM1O00151 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM1O00151 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDLIM1O00151 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM1O00151 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM1O00151 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM1O00151 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM1O00151 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM1O00151 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM1O00151 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM1O00151 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM1O00151 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM1O00151 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM1O00151 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDLIM1O00151 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms