Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20■□□□□ 0.79
RCCD1A6NED2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 MTDHP1-201ENST00000605323 784 ntBASIC20■□□□□ 0.79
RCCD1A6NED2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20■□□□□ 0.79
RCCD1A6NED2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20■□□□□ 0.79
RCCD1A6NED2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RCCD1A6NED2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20■□□□□ 0.79
RCCD1A6NED2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20■□□□□ 0.79
RCCD1A6NED2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20■□□□□ 0.79
RCCD1A6NED2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCCD1A6NED2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 PRKY-204ENST00000533551 1019 ntBASIC19.99■□□□□ 0.79
RCCD1A6NED2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 AL357033.4-201ENST00000617703 1807 ntBASIC19.99■□□□□ 0.79
RCCD1A6NED2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
RCCD1A6NED2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RCCD1A6NED2 AC093677.2-201ENST00000600169 1863 ntBASIC19.99■□□□□ 0.79
RCCD1A6NED2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.98■□□□□ 0.79
RCCD1A6NED2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCCD1A6NED2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 AC104771.1-201ENST00000603335 964 ntBASIC19.97■□□□□ 0.79
RCCD1A6NED2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RCCD1A6NED2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
RCCD1A6NED2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCCD1A6NED2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms