Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 AC135776.1-201ENST00000319817 2481 ntBASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV27A0A0K0K1C4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 RCC2P6-201ENST00000526625 1557 ntBASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 MTMR9LP-203ENST00000426597 1545 ntBASIC13.29□□□□□ -0.28
TRBV27A0A0K0K1C4 LINC00896-202ENST00000609602 2128 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 HTR7P1-202ENST00000624664 4411 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AC134043.2-201ENST00000624206 2238 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AL160286.2-201ENST00000567150 934 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AC112777.1-201ENST00000540175 1423 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AL499627.1-201ENST00000569373 2188 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV27A0A0K0K1C4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV27A0A0K0K1C4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms