Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC098590.1-201ENST00000468126 897 ntBASIC21.5■■□□□ 1.03
CLIC4Q9Y696 B3GAT3P1-201ENST00000471720 806 ntBASIC21.5■■□□□ 1.03
CLIC4Q9Y696 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.5■■□□□ 1.03
CLIC4Q9Y696 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 CKBP1-201ENST00000565489 1086 ntBASIC21.49■■□□□ 1.03
CLIC4Q9Y696 AC026271.3-201ENST00000571884 352 ntBASIC21.49■■□□□ 1.03
CLIC4Q9Y696 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 MIR6786-201ENST00000616843 113 ntBASIC21.49■■□□□ 1.03
CLIC4Q9Y696 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLIC4Q9Y696 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.48■■□□□ 1.03
CLIC4Q9Y696 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 FAM207BP-201ENST00000447172 505 ntBASIC21.47■■□□□ 1.03
CLIC4Q9Y696 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 AL354751.1-201ENST00000412768 1863 ntBASIC21.47■■□□□ 1.03
CLIC4Q9Y696 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC4Q9Y696 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms