Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 TMPOP1-202ENST00000424642 1267 ntBASIC19.92■□□□□ 0.78
CYLDQ9NQC7 AC010203.1-204ENST00000548782 407 ntBASIC19.92■□□□□ 0.78
CYLDQ9NQC7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CYLDQ9NQC7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 HMGA1P5-201ENST00000412453 271 ntBASIC19.91■□□□□ 0.78
CYLDQ9NQC7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 AC083906.6-201ENST00000641366 219 ntBASIC19.91■□□□□ 0.78
CYLDQ9NQC7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CYLDQ9NQC7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 KRT8P32-201ENST00000512863 1461 ntBASIC19.9■□□□□ 0.78
CYLDQ9NQC7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CYLDQ9NQC7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.89■□□□□ 0.78
CYLDQ9NQC7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 AL512353.2-201ENST00000448759 1962 ntBASIC19.89■□□□□ 0.77
CYLDQ9NQC7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYLDQ9NQC7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 NEFHP1-201ENST00000412845 2629 ntBASIC19.88■□□□□ 0.77
CYLDQ9NQC7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 KRT18P57-201ENST00000443599 1254 ntBASIC19.88■□□□□ 0.77
CYLDQ9NQC7 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.88■□□□□ 0.77
CYLDQ9NQC7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYLDQ9NQC7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms