Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 AP000523.1-201ENST00000398242 1049 ntBASIC20.65■□□□□ 0.9
TRIM6Q9C030 TSPY5P-201ENST00000426936 936 ntBASIC20.65■□□□□ 0.9
TRIM6Q9C030 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6Q9C030 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TRIM6Q9C030 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TRIM6Q9C030 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM6Q9C030 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM6Q9C030 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM6Q9C030 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 AFG3L1P-217ENST00000557444 2447 ntBASIC20.64■□□□□ 0.89
TRIM6Q9C030 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6Q9C030 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6Q9C030 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6Q9C030 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6Q9C030 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6Q9C030 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6Q9C030 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRIM6Q9C030 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6Q9C030 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.63■□□□□ 0.89
TRIM6Q9C030 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 AC011558.1-201ENST00000623459 338 ntBASIC20.63■□□□□ 0.89
TRIM6Q9C030 AL023973.1-201ENST00000624619 620 ntBASIC20.63■□□□□ 0.89
TRIM6Q9C030 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM6Q9C030 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6Q9C030 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 AC009947.2-201ENST00000444014 672 ntBASIC20.62■□□□□ 0.89
TRIM6Q9C030 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 MIR4674-201ENST00000582457 87 ntBASIC20.62■□□□□ 0.89
TRIM6Q9C030 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6Q9C030 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM6Q9C030 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6Q9C030 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6Q9C030 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6Q9C030 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6Q9C030 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM6Q9C030 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM6Q9C030 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6Q9C030 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6Q9C030 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms