Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APH1BQ8WW43 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APH1BQ8WW43 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APH1BQ8WW43 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
APH1BQ8WW43 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APH1BQ8WW43 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APH1BQ8WW43 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.02■□□□□ 0.31
APH1BQ8WW43 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.02■□□□□ 0.31
APH1BQ8WW43 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 TUBB8P6-201ENST00000436895 1288 ntBASIC17.01■□□□□ 0.31
APH1BQ8WW43 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 AL121906.2-201ENST00000621597 723 ntBASIC17.01■□□□□ 0.31
APH1BQ8WW43 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
APH1BQ8WW43 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APH1BQ8WW43 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
APH1BQ8WW43 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17■□□□□ 0.31
APH1BQ8WW43 AC012317.2-201ENST00000623305 2251 ntBASIC17■□□□□ 0.31
APH1BQ8WW43 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17■□□□□ 0.31
APH1BQ8WW43 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17■□□□□ 0.31
APH1BQ8WW43 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APH1BQ8WW43 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17■□□□□ 0.31
APH1BQ8WW43 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17■□□□□ 0.31
APH1BQ8WW43 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17■□□□□ 0.31
APH1BQ8WW43 RCC2P6-201ENST00000526625 1557 ntBASIC17■□□□□ 0.31
APH1BQ8WW43 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17■□□□□ 0.31
APH1BQ8WW43 MAX-217ENST00000557277 728 ntTSL 3 BASIC17■□□□□ 0.31
APH1BQ8WW43 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17■□□□□ 0.31
APH1BQ8WW43 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17■□□□□ 0.31
APH1BQ8WW43 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17■□□□□ 0.31
APH1BQ8WW43 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17■□□□□ 0.31
APH1BQ8WW43 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APH1BQ8WW43 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 AC080080.1-201ENST00000625121 2420 ntBASIC16.99■□□□□ 0.31
APH1BQ8WW43 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 AC068587.9-201ENST00000641814 219 ntBASIC16.99■□□□□ 0.31
APH1BQ8WW43 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
APH1BQ8WW43 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APH1BQ8WW43 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.98■□□□□ 0.31
APH1BQ8WW43 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
APH1BQ8WW43 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms