Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC01561Q8N1V8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01561Q8N1V8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.65□□□□□ -0.39
LINC01561Q8N1V8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 RCC2P6-201ENST00000526625 1557 ntBASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 HLA-A-209ENST00000638375 975 ntBASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01561Q8N1V8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 CROCCP5-201ENST00000436658 830 ntBASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01561Q8N1V8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 KRT8P32-201ENST00000512863 1461 ntBASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 AC006970.2-201ENST00000450065 779 ntBASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01561Q8N1V8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms