Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 AC009947.2-201ENST00000444014 672 ntBASIC17.46■□□□□ 0.39
BEST3Q8N1M1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 AL441883.1-201ENST00000566170 1045 ntBASIC17.46■□□□□ 0.39
BEST3Q8N1M1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
BEST3Q8N1M1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.46■□□□□ 0.38
BEST3Q8N1M1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
BEST3Q8N1M1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
BEST3Q8N1M1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.38
BEST3Q8N1M1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.45■□□□□ 0.38
BEST3Q8N1M1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.45■□□□□ 0.38
BEST3Q8N1M1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 AC008622.2-201ENST00000617006 1229 ntBASIC17.45■□□□□ 0.38
BEST3Q8N1M1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BEST3Q8N1M1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 BX323043.1-201ENST00000641006 1765 ntBASIC17.44■□□□□ 0.38
BEST3Q8N1M1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 MYC-208ENST00000641036 567 ntBASIC17.44■□□□□ 0.38
BEST3Q8N1M1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.44■□□□□ 0.38
BEST3Q8N1M1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 AP000523.1-201ENST00000398242 1049 ntBASIC17.43■□□□□ 0.38
BEST3Q8N1M1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 HOMER2P1-201ENST00000455653 964 ntBASIC17.43■□□□□ 0.38
BEST3Q8N1M1 AL359075.1-203ENST00000462729 1002 ntBASIC17.43■□□□□ 0.38
BEST3Q8N1M1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.43■□□□□ 0.38
BEST3Q8N1M1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms