Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 AC004264.1-201ENST00000608354 794 ntBASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D4Q7Z3S7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.64■□□□□ 0.9
CACNA2D4Q7Z3S7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA2D4Q7Z3S7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.64■□□□□ 0.9
CACNA2D4Q7Z3S7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA2D4Q7Z3S7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA2D4Q7Z3S7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA2D4Q7Z3S7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 TSPY7P-201ENST00000431358 1114 ntBASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 TSPY21P-201ENST00000433481 731 ntBASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 AL160286.2-201ENST00000567150 934 ntBASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D4Q7Z3S7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D4Q7Z3S7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 C1QL1P1-201ENST00000568105 661 ntBASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 AC133561.5-201ENST00000635547 218 ntBASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 HLA-A-209ENST00000638375 975 ntBASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CACNA2D4Q7Z3S7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CACNA2D4Q7Z3S7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms