Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 RPPH1-201ENST00000516869 333 ntBASIC12.46□□□□□ -0.41
SYCNQ0VAF6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 MIR4651-201ENST00000582622 73 ntBASIC12.46□□□□□ -0.41
SYCNQ0VAF6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SYCNQ0VAF6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.46□□□□□ -0.42
SYCNQ0VAF6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SYCNQ0VAF6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 KRT18P29-201ENST00000397031 1267 ntBASIC12.45□□□□□ -0.42
SYCNQ0VAF6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 AL353708.3-201ENST00000610272 989 ntBASIC12.45□□□□□ -0.42
SYCNQ0VAF6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 KRT8P41-201ENST00000533985 1514 ntBASIC12.45□□□□□ -0.42
SYCNQ0VAF6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 CROCCP3-202ENST00000420820 1947 ntBASIC12.45□□□□□ -0.42
SYCNQ0VAF6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SYCNQ0VAF6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 Z85996.1-201ENST00000494644 937 ntBASIC12.44□□□□□ -0.42
SYCNQ0VAF6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.44□□□□□ -0.42
SYCNQ0VAF6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms