Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNA1Q09470 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
KCNA1Q09470 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA1Q09470 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA1Q09470 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA1Q09470 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KCNA1Q09470 C2orf69P3-201ENST00000565542 1120 ntBASIC20.66■□□□□ 0.9
KCNA1Q09470 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNA1Q09470 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
KCNA1Q09470 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KCNA1Q09470 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.66■□□□□ 0.9
KCNA1Q09470 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KCNA1Q09470 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA1Q09470 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
KCNA1Q09470 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
KCNA1Q09470 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNA1Q09470 AL499627.1-201ENST00000569373 2188 ntBASIC20.65■□□□□ 0.9
KCNA1Q09470 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 AC093525.10-201ENST00000625130 1569 ntBASIC20.65■□□□□ 0.9
KCNA1Q09470 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.65■□□□□ 0.9
KCNA1Q09470 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 ECEL1P2-202ENST00000465689 757 ntBASIC20.65■□□□□ 0.9
KCNA1Q09470 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 EGLN1P1-201ENST00000531623 762 ntBASIC20.65■□□□□ 0.9
KCNA1Q09470 AC073912.3-201ENST00000624414 853 ntBASIC20.65■□□□□ 0.9
KCNA1Q09470 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
KCNA1Q09470 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA1Q09470 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA1Q09470 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNA1Q09470 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
KCNA1Q09470 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNA1Q09470 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
KCNA1Q09470 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNA1Q09470 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.64■□□□□ 0.9
KCNA1Q09470 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.64■□□□□ 0.9
KCNA1Q09470 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNA1Q09470 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA1Q09470 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA1Q09470 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA1Q09470 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNA1Q09470 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNA1Q09470 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNA1Q09470 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
KCNA1Q09470 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA1Q09470 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNA1Q09470 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNA1Q09470 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNA1Q09470 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA1Q09470 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA1Q09470 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNA1Q09470 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA1Q09470 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCNA1Q09470 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA1Q09470 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
KCNA1Q09470 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA1Q09470 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA1Q09470 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA1Q09470 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNA1Q09470 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNA1Q09470 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNA1Q09470 AL357033.4-201ENST00000617703 1807 ntBASIC20.63■□□□□ 0.89
KCNA1Q09470 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA1Q09470 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KCNA1Q09470 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNA1Q09470 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA1Q09470 TSPY17P-201ENST00000450329 467 ntBASIC20.63■□□□□ 0.89
KCNA1Q09470 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNA1Q09470 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNA1Q09470 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNA1Q09470 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNA1Q09470 FAM87A-204ENST00000613235 858 ntBASIC20.63■□□□□ 0.89
KCNA1Q09470 AC116562.4-202ENST00000641738 218 ntBASIC20.63■□□□□ 0.89
KCNA1Q09470 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNA1Q09470 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
KCNA1Q09470 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNA1Q09470 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms