Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM11AP58511 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM11AP58511 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMIM11AP58511 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM11AP58511 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM11AP58511 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMIM11AP58511 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 NOC2LP2-201ENST00000407594 1944 ntBASIC17.37■□□□□ 0.37
SMIM11AP58511 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SMIM11AP58511 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SMIM11AP58511 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SMIM11AP58511 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.37■□□□□ 0.37
SMIM11AP58511 GUSBP6-202ENST00000438529 1198 ntBASIC17.37■□□□□ 0.37
SMIM11AP58511 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.37■□□□□ 0.37
SMIM11AP58511 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.37■□□□□ 0.37
SMIM11AP58511 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.37■□□□□ 0.37
SMIM11AP58511 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.37■□□□□ 0.37
SMIM11AP58511 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 AC004264.1-201ENST00000608354 794 ntBASIC17.37■□□□□ 0.37
SMIM11AP58511 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMIM11AP58511 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.37■□□□□ 0.37
SMIM11AP58511 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SMIM11AP58511 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SMIM11AP58511 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SMIM11AP58511 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.36■□□□□ 0.37
SMIM11AP58511 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SMIM11AP58511 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.36■□□□□ 0.37
SMIM11AP58511 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.36■□□□□ 0.37
SMIM11AP58511 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.36■□□□□ 0.37
SMIM11AP58511 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 AL138781.1-201ENST00000566567 1274 ntBASIC17.36■□□□□ 0.37
SMIM11AP58511 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.36■□□□□ 0.37
SMIM11AP58511 MYC-208ENST00000641036 567 ntBASIC17.36■□□□□ 0.37
SMIM11AP58511 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SMIM11AP58511 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM11AP58511 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMIM11AP58511 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11AP58511 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11AP58511 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11AP58511 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
SMIM11AP58511 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SMIM11AP58511 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11AP58511 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM11AP58511 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
SMIM11AP58511 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM11AP58511 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11AP58511 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11AP58511 C1QL1P1-201ENST00000568105 661 ntBASIC17.35■□□□□ 0.37
SMIM11AP58511 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.35■□□□□ 0.37
SMIM11AP58511 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.35■□□□□ 0.37
SMIM11AP58511 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.35■□□□□ 0.37
SMIM11AP58511 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.35■□□□□ 0.37
SMIM11AP58511 HLA-A-209ENST00000638375 975 ntBASIC17.35■□□□□ 0.37
SMIM11AP58511 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM11AP58511 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.35■□□□□ 0.37
SMIM11AP58511 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
SMIM11AP58511 HEIH-201ENST00000623091 1652 ntBASIC17.35■□□□□ 0.37
SMIM11AP58511 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms