Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH13P55290 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CDH13P55290 AC124016.1-201ENST00000609552 612 ntBASIC18.43■□□□□ 0.54
CDH13P55290 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CDH13P55290 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH13P55290 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.43■□□□□ 0.54
CDH13P55290 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH13P55290 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH13P55290 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDH13P55290 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDH13P55290 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH13P55290 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH13P55290 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH13P55290 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH13P55290 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH13P55290 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH13P55290 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH13P55290 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH13P55290 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.42■□□□□ 0.54
CDH13P55290 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.42■□□□□ 0.54
CDH13P55290 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CDH13P55290 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH13P55290 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH13P55290 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH13P55290 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH13P55290 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH13P55290 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH13P55290 RN7SL471P-201ENST00000580476 299 ntBASIC18.41■□□□□ 0.54
CDH13P55290 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 RCC2P6-201ENST00000526625 1557 ntBASIC18.41■□□□□ 0.54
CDH13P55290 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
CDH13P55290 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH13P55290 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH13P55290 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH13P55290 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH13P55290 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDH13P55290 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 AC005332.8-201ENST00000622750 2735 ntBASIC18.4■□□□□ 0.54
CDH13P55290 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 AL133373.2-201ENST00000623187 2828 ntBASIC18.4■□□□□ 0.54
CDH13P55290 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDH13P55290 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 POU5F1P3-201ENST00000428824 1078 ntBASIC18.4■□□□□ 0.54
CDH13P55290 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH13P55290 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH13P55290 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH13P55290 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.4■□□□□ 0.54
CDH13P55290 AC110285.5-201ENST00000611501 352 ntBASIC18.4■□□□□ 0.54
CDH13P55290 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDH13P55290 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 AC026471.1-201ENST00000564629 3026 ntBASIC18.4■□□□□ 0.54
CDH13P55290 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH13P55290 KRT8P11-201ENST00000409686 1436 ntBASIC18.4■□□□□ 0.54
CDH13P55290 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
CDH13P55290 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH13P55290 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH13P55290 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH13P55290 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH13P55290 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH13P55290 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH13P55290 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH13P55290 HEIH-201ENST00000623091 1652 ntBASIC18.39■□□□□ 0.53
CDH13P55290 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH13P55290 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms