Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDKN2DP55273 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDKN2DP55273 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 FSCN1P1-201ENST00000568912 1481 ntBASIC18.6■□□□□ 0.57
CDKN2DP55273 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKN2DP55273 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 RPS2P55-201ENST00000397318 883 ntBASIC18.6■□□□□ 0.57
CDKN2DP55273 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.6■□□□□ 0.57
CDKN2DP55273 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.6■□□□□ 0.57
CDKN2DP55273 UBE2SP1-201ENST00000450587 669 ntBASIC18.6■□□□□ 0.57
CDKN2DP55273 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 AC107956.1-201ENST00000494359 873 ntBASIC18.6■□□□□ 0.57
CDKN2DP55273 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.6■□□□□ 0.57
CDKN2DP55273 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.6■□□□□ 0.57
CDKN2DP55273 AP000692.2-201ENST00000608391 879 ntBASIC18.6■□□□□ 0.57
CDKN2DP55273 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKN2DP55273 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDKN2DP55273 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKN2DP55273 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDKN2DP55273 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKN2DP55273 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDKN2DP55273 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.6■□□□□ 0.57
CDKN2DP55273 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
CDKN2DP55273 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CDKN2DP55273 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDKN2DP55273 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKN2DP55273 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDKN2DP55273 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.59■□□□□ 0.57
CDKN2DP55273 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDKN2DP55273 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.59■□□□□ 0.57
CDKN2DP55273 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 AC113410.3-201ENST00000623366 203 ntBASIC18.59■□□□□ 0.57
CDKN2DP55273 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDKN2DP55273 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDKN2DP55273 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDKN2DP55273 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDKN2DP55273 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN2DP55273 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN2DP55273 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN2DP55273 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN2DP55273 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN2DP55273 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDKN2DP55273 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN2DP55273 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CDKN2DP55273 NUDT16P1-203ENST00000513809 620 ntBASIC18.58■□□□□ 0.56
CDKN2DP55273 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKN2DP55273 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKN2DP55273 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN2DP55273 AC135050.7-201ENST00000624508 2218 ntBASIC18.58■□□□□ 0.56
CDKN2DP55273 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN2DP55273 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CDKN2DP55273 AL357033.4-201ENST00000617703 1807 ntBASIC18.58■□□□□ 0.56
CDKN2DP55273 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN2DP55273 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKN2DP55273 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKN2DP55273 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKN2DP55273 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKN2DP55273 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDKN2DP55273 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKN2DP55273 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDKN2DP55273 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKN2DP55273 AC116562.2-201ENST00000507042 360 ntBASIC18.57■□□□□ 0.56
CDKN2DP55273 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms