Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 AC093677.2-201ENST00000600169 1863 ntBASIC17.2■□□□□ 0.34
HMGA2P52926 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGA2P52926 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.2■□□□□ 0.34
HMGA2P52926 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.2■□□□□ 0.34
HMGA2P52926 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGA2P52926 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGA2P52926 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGA2P52926 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGA2P52926 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.19■□□□□ 0.34
HMGA2P52926 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HMGA2P52926 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGA2P52926 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGA2P52926 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGA2P52926 AL138781.1-201ENST00000566567 1274 ntBASIC17.19■□□□□ 0.34
HMGA2P52926 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGA2P52926 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGA2P52926 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.19■□□□□ 0.34
HMGA2P52926 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGA2P52926 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGA2P52926 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGA2P52926 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HMGA2P52926 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGA2P52926 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HMGA2P52926 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HMGA2P52926 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGA2P52926 AC133041.1-202ENST00000642053 222 ntBASIC17.18■□□□□ 0.34
HMGA2P52926 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGA2P52926 AL357033.4-201ENST00000617703 1807 ntBASIC17.18■□□□□ 0.34
HMGA2P52926 KRT8P11-201ENST00000409686 1436 ntBASIC17.18■□□□□ 0.34
HMGA2P52926 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGA2P52926 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGA2P52926 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGA2P52926 AC020763.4-201ENST00000623414 4170 ntBASIC17.18■□□□□ 0.34
HMGA2P52926 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HMGA2P52926 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGA2P52926 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGA2P52926 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
HMGA2P52926 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms