Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 AC142086.2-201ENST00000569753 217 ntBASIC17.51■□□□□ 0.39
TNFRSF1BP20333 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 KRT8P41-201ENST00000533985 1514 ntBASIC17.51■□□□□ 0.39
TNFRSF1BP20333 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 UNC93B5-201ENST00000530315 699 ntBASIC17.5■□□□□ 0.39
TNFRSF1BP20333 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 AC233263.1-201ENST00000578059 224 ntBASIC17.5■□□□□ 0.39
TNFRSF1BP20333 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TNFRSF1BP20333 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 AC067852.2-201ENST00000590513 2313 ntBASIC17.49■□□□□ 0.39
TNFRSF1BP20333 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFRSF1BP20333 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 NOC2LP2-201ENST00000407594 1944 ntBASIC17.48■□□□□ 0.39
TNFRSF1BP20333 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms