Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM228BP0C875 NIFKP9-201ENST00000419265 221 ntBASIC20.1■□□□□ 0.81
FAM228BP0C875 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM228BP0C875 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
FAM228BP0C875 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.1■□□□□ 0.81
FAM228BP0C875 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM228BP0C875 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM228BP0C875 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM228BP0C875 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM228BP0C875 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM228BP0C875 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
FAM228BP0C875 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.1■□□□□ 0.81
FAM228BP0C875 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.1■□□□□ 0.81
FAM228BP0C875 KRT8P32-201ENST00000512863 1461 ntBASIC20.1■□□□□ 0.81
FAM228BP0C875 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
FAM228BP0C875 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 RPS2P4-201ENST00000476944 856 ntBASIC20.09■□□□□ 0.81
FAM228BP0C875 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM228BP0C875 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.09■□□□□ 0.81
FAM228BP0C875 AC131212.4-201ENST00000623606 975 ntBASIC20.09■□□□□ 0.81
FAM228BP0C875 AC073648.6-201ENST00000641589 218 ntBASIC20.09■□□□□ 0.81
FAM228BP0C875 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM228BP0C875 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM228BP0C875 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM228BP0C875 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.09■□□□□ 0.81
FAM228BP0C875 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM228BP0C875 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.09■□□□□ 0.81
FAM228BP0C875 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FAM228BP0C875 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FAM228BP0C875 ABALON-201ENST00000629058 1903 ntBASIC20.08■□□□□ 0.81
FAM228BP0C875 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.08■□□□□ 0.81
FAM228BP0C875 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FAM228BP0C875 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FAM228BP0C875 AC091390.4-202ENST00000476426 537 ntBASIC20.08■□□□□ 0.81
FAM228BP0C875 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.08■□□□□ 0.81
FAM228BP0C875 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM228BP0C875 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM228BP0C875 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM228BP0C875 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
FAM228BP0C875 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.08■□□□□ 0.8
FAM228BP0C875 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM228BP0C875 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM228BP0C875 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
FAM228BP0C875 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM228BP0C875 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.08■□□□□ 0.8
FAM228BP0C875 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.07■□□□□ 0.8
FAM228BP0C875 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.07■□□□□ 0.8
FAM228BP0C875 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FAM228BP0C875 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.07■□□□□ 0.8
FAM228BP0C875 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.07■□□□□ 0.8
FAM228BP0C875 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 PRSS44-201ENST00000515154 1146 ntBASIC20.07■□□□□ 0.8
FAM228BP0C875 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.07■□□□□ 0.8
FAM228BP0C875 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.07■□□□□ 0.8
FAM228BP0C875 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.07■□□□□ 0.8
FAM228BP0C875 KRT8P3-201ENST00000519669 1449 ntBASIC20.07■□□□□ 0.8
FAM228BP0C875 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
FAM228BP0C875 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FAM228BP0C875 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.07■□□□□ 0.8
FAM228BP0C875 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM228BP0C875 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FAM228BP0C875 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.06■□□□□ 0.8
FAM228BP0C875 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.06■□□□□ 0.8
FAM228BP0C875 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.06■□□□□ 0.8
FAM228BP0C875 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
FAM228BP0C875 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.06■□□□□ 0.8
FAM228BP0C875 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
FAM228BP0C875 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.06■□□□□ 0.8
FAM228BP0C875 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FAM228BP0C875 AC006058.3-201ENST00000606217 1069 ntBASIC20.06■□□□□ 0.8
FAM228BP0C875 AL353708.3-201ENST00000610272 989 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms