Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HIST1H2ABP04908 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 AL353807.1-201ENST00000427475 662 ntBASIC17.17■□□□□ 0.34
HIST1H2ABP04908 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 CROCCP3-202ENST00000420820 1947 ntBASIC17.17■□□□□ 0.34
HIST1H2ABP04908 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HIST1H2ABP04908 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 TSPY23P-201ENST00000440136 739 ntBASIC17.16■□□□□ 0.34
HIST1H2ABP04908 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 AL445675.2-201ENST00000620291 557 ntBASIC17.16■□□□□ 0.34
HIST1H2ABP04908 FAM197Y4-202ENST00000622692 608 ntBASIC17.16■□□□□ 0.34
HIST1H2ABP04908 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.16■□□□□ 0.34
HIST1H2ABP04908 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 HTR7P1-201ENST00000538670 1336 ntBASIC17.16■□□□□ 0.34
HIST1H2ABP04908 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HIST1H2ABP04908 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.15■□□□□ 0.34
HIST1H2ABP04908 AL138781.2-201ENST00000617896 1843 ntBASIC17.15■□□□□ 0.34
HIST1H2ABP04908 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms