Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDRT1O95170 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDRT1O95170 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 LINC00896-202ENST00000609602 2128 ntBASIC16.8■□□□□ 0.28
CDRT1O95170 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.8■□□□□ 0.28
CDRT1O95170 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDRT1O95170 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.8■□□□□ 0.28
CDRT1O95170 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDRT1O95170 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
CDRT1O95170 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDRT1O95170 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.79■□□□□ 0.28
CDRT1O95170 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.79■□□□□ 0.28
CDRT1O95170 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.79■□□□□ 0.28
CDRT1O95170 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDRT1O95170 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.79■□□□□ 0.28
CDRT1O95170 RARRES2P6-201ENST00000567333 442 ntBASIC16.79■□□□□ 0.28
CDRT1O95170 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.79■□□□□ 0.28
CDRT1O95170 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.79■□□□□ 0.28
CDRT1O95170 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CDRT1O95170 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDRT1O95170 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDRT1O95170 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CDRT1O95170 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CDRT1O95170 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDRT1O95170 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDRT1O95170 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.78■□□□□ 0.28
CDRT1O95170 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 AC009053.2-201ENST00000563701 2365 ntBASIC16.78■□□□□ 0.28
CDRT1O95170 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDRT1O95170 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.78■□□□□ 0.28
CDRT1O95170 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDRT1O95170 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDRT1O95170 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDRT1O95170 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.78■□□□□ 0.28
CDRT1O95170 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.78■□□□□ 0.28
CDRT1O95170 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
CDRT1O95170 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CDRT1O95170 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CDRT1O95170 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDRT1O95170 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.77■□□□□ 0.28
CDRT1O95170 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 AC134043.2-201ENST00000624206 2238 ntBASIC16.77■□□□□ 0.28
CDRT1O95170 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.77■□□□□ 0.28
CDRT1O95170 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.77■□□□□ 0.28
CDRT1O95170 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.77■□□□□ 0.28
CDRT1O95170 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.77■□□□□ 0.28
CDRT1O95170 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.77■□□□□ 0.28
CDRT1O95170 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDRT1O95170 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms