Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.63■□□□□ 0.73
OPHN1O60890 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.63■□□□□ 0.73
OPHN1O60890 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 AC087388.1-201ENST00000571370 1112 ntBASIC19.63■□□□□ 0.73
OPHN1O60890 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.63■□□□□ 0.73
OPHN1O60890 NTF6B-201ENST00000591913 560 ntBASIC19.63■□□□□ 0.73
OPHN1O60890 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 AL049812.1-201ENST00000432563 2267 ntBASIC19.63■□□□□ 0.73
OPHN1O60890 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
OPHN1O60890 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPHN1O60890 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.62■□□□□ 0.73
OPHN1O60890 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
OPHN1O60890 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 AC004408.2-201ENST00000623613 2777 ntBASIC19.62■□□□□ 0.73
OPHN1O60890 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.62■□□□□ 0.73
OPHN1O60890 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
OPHN1O60890 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.62■□□□□ 0.73
OPHN1O60890 KSR1P1-201ENST00000446298 240 ntBASIC19.62■□□□□ 0.73
OPHN1O60890 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.62■□□□□ 0.73
OPHN1O60890 DUX4L26-201ENST00000489078 1255 ntBASIC19.62■□□□□ 0.73
OPHN1O60890 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.62■□□□□ 0.73
OPHN1O60890 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.62■□□□□ 0.73
OPHN1O60890 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
OPHN1O60890 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.62■□□□□ 0.73
OPHN1O60890 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.62■□□□□ 0.73
OPHN1O60890 AC010947.1-201ENST00000623454 693 ntBASIC19.62■□□□□ 0.73
OPHN1O60890 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
OPHN1O60890 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.62■□□□□ 0.73
OPHN1O60890 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
OPHN1O60890 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPHN1O60890 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 AC120498.9-201ENST00000339021 3867 ntBASIC19.61■□□□□ 0.73
OPHN1O60890 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 FP475955.4-201ENST00000623131 1990 ntBASIC19.61■□□□□ 0.73
OPHN1O60890 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 AC116562.2-201ENST00000507042 360 ntBASIC19.61■□□□□ 0.73
OPHN1O60890 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 HLA-A-209ENST00000638375 975 ntBASIC19.61■□□□□ 0.73
OPHN1O60890 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
OPHN1O60890 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
OPHN1O60890 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
OPHN1O60890 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 AC073508.3-201ENST00000619697 1419 ntBASIC19.6■□□□□ 0.73
OPHN1O60890 IRX1P1-201ENST00000438849 1838 ntBASIC19.6■□□□□ 0.73
OPHN1O60890 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
OPHN1O60890 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
OPHN1O60890 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
OPHN1O60890 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.6■□□□□ 0.73
OPHN1O60890 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
OPHN1O60890 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPHN1O60890 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
OPHN1O60890 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms