Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.89□□□□□ -0.35
NDUFA1O15239 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.89□□□□□ -0.35
NDUFA1O15239 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.89□□□□□ -0.35
NDUFA1O15239 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
NDUFA1O15239 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.89□□□□□ -0.35
NDUFA1O15239 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.89□□□□□ -0.35
NDUFA1O15239 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.89□□□□□ -0.35
NDUFA1O15239 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.89□□□□□ -0.35
NDUFA1O15239 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NDUFA1O15239 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NDUFA1O15239 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NDUFA1O15239 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NDUFA1O15239 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.89□□□□□ -0.35
NDUFA1O15239 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.88□□□□□ -0.35
NDUFA1O15239 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
NDUFA1O15239 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
NDUFA1O15239 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NDUFA1O15239 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.88□□□□□ -0.35
NDUFA1O15239 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.88□□□□□ -0.35
NDUFA1O15239 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.88□□□□□ -0.35
NDUFA1O15239 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.88□□□□□ -0.35
NDUFA1O15239 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.88□□□□□ -0.35
NDUFA1O15239 AC004911.1-201ENST00000416316 871 ntBASIC12.88□□□□□ -0.35
NDUFA1O15239 BX276092.2-201ENST00000417668 665 ntBASIC12.88□□□□□ -0.35
NDUFA1O15239 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.88□□□□□ -0.35
NDUFA1O15239 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.88□□□□□ -0.35
NDUFA1O15239 AL137784.2-201ENST00000607332 1000 ntBASIC12.88□□□□□ -0.35
NDUFA1O15239 AC080038.1-201ENST00000611274 1154 ntBASIC12.88□□□□□ -0.35
NDUFA1O15239 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.88□□□□□ -0.35
NDUFA1O15239 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.88□□□□□ -0.35
NDUFA1O15239 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.88□□□□□ -0.35
NDUFA1O15239 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NDUFA1O15239 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.88□□□□□ -0.35
NDUFA1O15239 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.88□□□□□ -0.35
NDUFA1O15239 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.88□□□□□ -0.35
NDUFA1O15239 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.88□□□□□ -0.35
NDUFA1O15239 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NDUFA1O15239 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.87□□□□□ -0.35
NDUFA1O15239 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.87□□□□□ -0.35
NDUFA1O15239 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NDUFA1O15239 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms