Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SOCS3O14543 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SOCS3O14543 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SOCS3O14543 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SOCS3O14543 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SOCS3O14543 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SOCS3O14543 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SOCS3O14543 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SOCS3O14543 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.2□□□□□ -0.14
SOCS3O14543 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 AC009113.1-201ENST00000570267 2443 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SOCS3O14543 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 MESTP1-201ENST00000404287 994 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 AC098590.1-201ENST00000468126 897 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 B3GAT3P1-201ENST00000471720 806 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 AC011506.1-201ENST00000474329 610 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.2□□□□□ -0.14
SOCS3O14543 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.2□□□□□ -0.14
SOCS3O14543 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 CKBP1-201ENST00000565489 1086 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 MIR6786-201ENST00000616843 113 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.2□□□□□ -0.14
SOCS3O14543 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.2□□□□□ -0.14
SOCS3O14543 MTMR9LP-203ENST00000426597 1545 ntBASIC14.2□□□□□ -0.14
SOCS3O14543 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SOCS3O14543 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.2□□□□□ -0.14
SOCS3O14543 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.2□□□□□ -0.14
SOCS3O14543 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SOCS3O14543 AC120498.9-201ENST00000339021 3867 ntBASIC14.19□□□□□ -0.14
SOCS3O14543 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.19□□□□□ -0.14
SOCS3O14543 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.19□□□□□ -0.14
SOCS3O14543 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.19□□□□□ -0.14
SOCS3O14543 KRT8P32-201ENST00000512863 1461 ntBASIC14.19□□□□□ -0.14
SOCS3O14543 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.19□□□□□ -0.14
SOCS3O14543 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.19□□□□□ -0.14
SOCS3O14543 AL135905.2-201ENST00000584934 1404 ntBASIC14.19□□□□□ -0.14
SOCS3O14543 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.19□□□□□ -0.14
SOCS3O14543 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.19□□□□□ -0.14
SOCS3O14543 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SOCS3O14543 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.19□□□□□ -0.14
SOCS3O14543 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
SOCS3O14543 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.19□□□□□ -0.14
SOCS3O14543 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SOCS3O14543 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.19□□□□□ -0.14
SOCS3O14543 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SOCS3O14543 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.19□□□□□ -0.14
SOCS3O14543 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SOCS3O14543 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOCS3O14543 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOCS3O14543 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.18□□□□□ -0.14
SOCS3O14543 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOCS3O14543 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SOCS3O14543 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.18□□□□□ -0.14
SOCS3O14543 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.18□□□□□ -0.14
SOCS3O14543 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SOCS3O14543 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOCS3O14543 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SOCS3O14543 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SOCS3O14543 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms