Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NIFKP9-201ENST00000419265 221 ntBASIC15.12■□□□□ 0.01
UPK2O00526 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 PRSS44-201ENST00000515154 1146 ntBASIC15.12■□□□□ 0.01
UPK2O00526 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.12■□□□□ 0.01
UPK2O00526 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
UPK2O00526 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
UPK2O00526 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK2O00526 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK2O00526 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.12■□□□□ 0.01
UPK2O00526 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
UPK2O00526 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.12■□□□□ 0.01
UPK2O00526 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UPK2O00526 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK2O00526 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK2O00526 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UPK2O00526 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK2O00526 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 AC073592.3-201ENST00000625118 1834 ntBASIC15.11■□□□□ 0.01
UPK2O00526 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UPK2O00526 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK2O00526 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
UPK2O00526 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK2O00526 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.11■□□□□ 0.01
UPK2O00526 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK2O00526 AC004980.1-204ENST00000429707 299 ntBASIC15.11■□□□□ 0.01
UPK2O00526 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UPK2O00526 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.11■□□□□ 0.01
UPK2O00526 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.11■□□□□ 0.01
UPK2O00526 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.11■□□□□ 0.01
UPK2O00526 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.11■□□□□ 0.01
UPK2O00526 AC068587.9-201ENST00000641814 219 ntBASIC15.11■□□□□ 0.01
UPK2O00526 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UPK2O00526 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UPK2O00526 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.11■□□□□ 0.01
UPK2O00526 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UPK2O00526 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 AC007613.1-201ENST00000572811 2597 ntBASIC15.11■□□□□ 0.01
UPK2O00526 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.11■□□□□ 0.01
UPK2O00526 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UPK2O00526 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UPK2O00526 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UPK2O00526 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK2O00526 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.1■□□□□ 0.01
UPK2O00526 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UPK2O00526 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK2O00526 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UPK2O00526 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 AP002982.1-201ENST00000492365 877 ntBASIC15.1■□□□□ 0.01
UPK2O00526 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
UPK2O00526 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
UPK2O00526 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK2O00526 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
UPK2O00526 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.1■□□□□ 0.01
UPK2O00526 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK2O00526 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
UPK2O00526 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.1■□□□□ 0.01
UPK2O00526 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UPK2O00526 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms