Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 NTF6G-201ENST00000591094 616 ntBASIC20.32■□□□□ 0.84
USP27XA6NNY8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.32■□□□□ 0.84
USP27XA6NNY8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.32■□□□□ 0.84
USP27XA6NNY8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
USP27XA6NNY8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
USP27XA6NNY8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
USP27XA6NNY8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 MTMR9LP-203ENST00000426597 1545 ntBASIC20.32■□□□□ 0.84
USP27XA6NNY8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP27XA6NNY8 HEIH-201ENST00000623091 1652 ntBASIC20.32■□□□□ 0.84
USP27XA6NNY8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.32■□□□□ 0.84
USP27XA6NNY8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.31■□□□□ 0.84
USP27XA6NNY8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP27XA6NNY8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.31■□□□□ 0.84
USP27XA6NNY8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
USP27XA6NNY8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP27XA6NNY8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
USP27XA6NNY8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.3■□□□□ 0.84
USP27XA6NNY8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 YBX1P10-201ENST00000444752 975 ntBASIC20.3■□□□□ 0.84
USP27XA6NNY8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP27XA6NNY8 REXO1L9P-201ENST00000604264 2108 ntBASIC20.3■□□□□ 0.84
USP27XA6NNY8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
USP27XA6NNY8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
USP27XA6NNY8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP27XA6NNY8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.28■□□□□ 0.84
USP27XA6NNY8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP27XA6NNY8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP27XA6NNY8 AP006587.1-201ENST00000534129 1502 ntBASIC20.28■□□□□ 0.84
USP27XA6NNY8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
USP27XA6NNY8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.28■□□□□ 0.84
USP27XA6NNY8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms