Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RCCD1A6NED2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RCCD1A6NED2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 KRT8P32-201ENST00000512863 1461 ntBASIC20.03■□□□□ 0.8
RCCD1A6NED2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCCD1A6NED2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.03■□□□□ 0.8
RCCD1A6NED2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 KRT8P11-201ENST00000409686 1436 ntBASIC20.02■□□□□ 0.8
RCCD1A6NED2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 ESPNP-201ENST00000270691 2015 ntBASIC20.02■□□□□ 0.8
RCCD1A6NED2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 UNC93B5-201ENST00000530315 699 ntBASIC20.02■□□□□ 0.8
RCCD1A6NED2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 AC133041.1-202ENST00000642053 222 ntBASIC20.02■□□□□ 0.8
RCCD1A6NED2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RCCD1A6NED2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCCD1A6NED2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
RCCD1A6NED2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RCCD1A6NED2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RCCD1A6NED2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RCCD1A6NED2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.02■□□□□ 0.79
RCCD1A6NED2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RCCD1A6NED2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.02■□□□□ 0.79
RCCD1A6NED2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
RCCD1A6NED2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.02■□□□□ 0.79
RCCD1A6NED2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RCCD1A6NED2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.01■□□□□ 0.79
RCCD1A6NED2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 AC142086.2-201ENST00000569753 217 ntBASIC20.01■□□□□ 0.79
RCCD1A6NED2 AC233263.1-201ENST00000578059 224 ntBASIC20.01■□□□□ 0.79
RCCD1A6NED2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 AL109923.1-201ENST00000618799 583 ntBASIC20.01■□□□□ 0.79
RCCD1A6NED2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RCCD1A6NED2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.01■□□□□ 0.79
RCCD1A6NED2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms