Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
LCE4AQ5TA78 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
LCE4AQ5TA78 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
LCE4AQ5TA78 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
LCE4AQ5TA78 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
LCE4AQ5TA78 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
LCE4AQ5TA78 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 Y_RNA.134-201ENST00000363435 105 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 SNORA44-201ENST00000384584 132 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 RNA5SP424-201ENST00000390988 115 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 RNU7-88P-201ENST00000458752 63 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 RN7SL330P-201ENST00000469709 307 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 RNA5SP227-201ENST00000516184 113 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 RNU6-1238P-201ENST00000517215 102 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 AC107016.2-201ENST00000547968 190 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 AP003355.3-201ENST00000623465 114 ntBASIC1.15□□□□□ -2.23
LCE4AQ5TA78 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.15□□□□□ -2.23
LCE4AQ5TA78 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 RNU1-112P-201ENST00000364401 164 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 RNU6-258P-201ENST00000390884 101 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 SNORD17-201ENST00000390930 237 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 Y_RNA.613-201ENST00000410726 97 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 HMGN2P22-201ENST00000427588 175 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 RNA5SP356-201ENST00000515972 94 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 RN7SKP88-201ENST00000516847 250 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 RNA5SP169-201ENST00000517268 117 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 MIR4658-201ENST00000584344 65 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 AL033523.1-201ENST00000605153 153 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 7SK.8-201ENST00000612110 250 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 7SK.13-201ENST00000622040 250 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 AC084768.2-201ENST00000622736 221 ntBASIC1.14□□□□□ -2.23
LCE4AQ5TA78 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
LCE4AQ5TA78 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 MIR202-201ENST00000362219 110 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 SNORA70B-201ENST00000384210 135 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 MIR934-201ENST00000401241 83 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 RNA5SP508-201ENST00000411327 119 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 EEF1A1P41-201ENST00000414667 207 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 RNA5SP67-201ENST00000516422 131 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 MIR4425-201ENST00000580572 84 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 MIR8069-1-201ENST00000616627 86 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 MIR8069-2-201ENST00000621412 86 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LCE4AQ5TA78 LINC02471-203ENST00000641941 4752 ntBASIC1.13□□□□□ -2.23
LCE4AQ5TA78 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LCE4AQ5TA78 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LCE4AQ5TA78 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.12□□□□□ -2.23
LCE4AQ5TA78 SNORA62.4-201ENST00000365504 151 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 Y_RNA.382-201ENST00000365672 114 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 MIR3074-201ENST00000384885 81 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 MIR221-201ENST00000385135 110 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 SNORD105-201ENST00000386910 85 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 RNU11-201ENST00000387069 134 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 MIR887-201ENST00000401258 79 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 RNA5SP184-201ENST00000411071 108 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 RNA5SP247-201ENST00000411181 105 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 RNU1-40P-201ENST00000516816 164 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 RNU1-97P-201ENST00000516872 164 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 AL360012.1-201ENST00000602813 131 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 AL591424.2-201ENST00000617023 128 ntBASIC1.12□□□□□ -2.23
LCE4AQ5TA78 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LCE4AQ5TA78 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
LCE4AQ5TA78 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LCE4AQ5TA78 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
LCE4AQ5TA78 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
LCE4AQ5TA78 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LCE4AQ5TA78 RNU1-15P-201ENST00000353977 144 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms