RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NISCHQ9Y2I1 1504 aa8.3□□□□□ -1.08
DEPDC1-202ENST00000456315 PPARGC1BQ86YN6 1023 aaKnown RBP8.17□□□□□ -1.1
DEPDC1-202ENST00000456315 HRCP23327 699 aa8.02□□□□□ -1.13
DEPDC1-202ENST00000456315 PCGF6Q9BYE7 350 aa7.89□□□□□ -1.15
DEPDC1-202ENST00000456315 MYO15BQ96JP2 1530 aa7.89□□□□□ -1.15
DEPDC1-202ENST00000456315 SCAF1Q9H7N4 1312 aaKnown RBP7.82□□□□□ -1.16
DEPDC1-202ENST00000456315 SHROOM4Q9ULL8 1493 aa7.77□□□□□ -1.17
DEPDC1-202ENST00000456315 SUPT5HO00267 1087 aaKnown RBP7.76□□□□□ -1.17
DEPDC1-202ENST00000456315 CHIC1Q5VXU3 224 aa7.7□□□□□ -1.18
DEPDC1-202ENST00000456315 LOC105371045A0A1W2PR82 267 aa7.69□□□□□ -1.18
DEPDC1-202ENST00000456315 NEUROD1Q13562 356 aa7.56□□□□□ -1.2
DEPDC1-202ENST00000456315 PELP1Q8IZL8 1130 aaKnown RBP7.43□□□□□ -1.22
DEPDC1-202ENST00000456315 CCDC180Q9P1Z9 1646 aa7.43□□□□□ -1.22
DEPDC1-202ENST00000456315 GTF3C3Q9Y5Q9 886 aa7.4□□□□□ -1.22
DEPDC1-202ENST00000456315 ACIN1Q9UKV3 1341 aaKnown RBP7.38□□□□□ -1.23
DEPDC1-202ENST00000456315 TRIM26Q12899 539 aaPredicted RBP7.36□□□□□ -1.23
DEPDC1-202ENST00000456315 DCAF1Q9Y4B6 1507 aa7.33□□□□□ -1.24
DEPDC1-202ENST00000456315 EHMT2Q96KQ7 1210 aa7.3□□□□□ -1.24
DEPDC1-202ENST00000456315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.29□□□□□ -1.24
DEPDC1-202ENST00000456315 FAM9AQ8IZU1 332 aaPredicted RBP7.24□□□□□ -1.25
DEPDC1-202ENST00000456315 DIEXFQ68CQ4 756 aaKnown RBP7.16□□□□□ -1.26
DEPDC1-202ENST00000456315 UNC13AQ9UPW8 1703 aa7.16□□□□□ -1.26
DEPDC1-202ENST00000456315 BCL11AQ9H165 835 aa7.14□□□□□ -1.27
DEPDC1-202ENST00000456315 YTHDC1Q96MU7 727 aaKnown RBP7.14□□□□□ -1.27
DEPDC1-202ENST00000456315 MIER1Q8N108 512 aa7.14□□□□□ -1.27
DEPDC1-202ENST00000456315 TRIM41Q8WV44 630 aa7.13□□□□□ -1.27
DEPDC1-202ENST00000456315 CSRNP3Q8WYN3 585 aa7.11□□□□□ -1.27
DEPDC1-202ENST00000456315 TTBK1Q5TCY1 1321 aaPredicted RBP7.1□□□□□ -1.27
DEPDC1-202ENST00000456315 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.27
DEPDC1-202ENST00000456315 ZEB1P37275 1124 aaPredicted RBP7.08□□□□□ -1.28
DEPDC1-202ENST00000456315 ZCCHC6Q5VYS8 1495 aaKnown RBP7.06□□□□□ -1.28
DEPDC1-202ENST00000456315 TSHZ2Q9NRE2 1034 aa7.06□□□□□ -1.28
DEPDC1-202ENST00000456315 KCNH8Q96L42 1107 aa7.05□□□□□ -1.28
DEPDC1-202ENST00000456315 CCER1Q8TC90 406 aaPredicted RBP7.03□□□□□ -1.28
DEPDC1-202ENST00000456315 PRKCSHP14314 528 aaPredicted RBP7.01□□□□□ -1.29
DEPDC1-202ENST00000456315 SUPT16HQ9Y5B9 1047 aaKnown RBP6.99□□□□□ -1.29
DEPDC1-202ENST00000456315 MSH5O43196 834 aa6.96□□□□□ -1.29
DEPDC1-202ENST00000456315 MYT1Q01538 1121 aa6.96□□□□□ -1.3
DEPDC1-202ENST00000456315 CENPBP07199 599 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1-202ENST00000456315 ANP32EQ9BTT0 268 aa6.94□□□□□ -1.3
DEPDC1-202ENST00000456315 ZNF316A6NFI3 1004 aaPredicted RBP6.93□□□□□ -1.3
DEPDC1-202ENST00000456315 BICRAQ9NZM4 1560 aa6.91□□□□□ -1.3
DEPDC1-202ENST00000456315 RSF1Q96T23 1441 aaPredicted RBP6.87□□□□□ -1.31
DEPDC1-202ENST00000456315 BCANQ96GW7 911 aa6.87□□□□□ -1.31
DEPDC1-202ENST00000456315 RB1CC1Q8TDY2 1594 aa6.87□□□□□ -1.31
DEPDC1-202ENST00000456315 ANO8Q9HCE9 1232 aaPredicted RBP6.86□□□□□ -1.31
DEPDC1-202ENST00000456315 ITGAEP38570 1179 aa6.84□□□□□ -1.31
DEPDC1-202ENST00000456315 UTRNP46939 3433 aa6.83□□□□□ -1.32
DEPDC1-202ENST00000456315 HNRNPUL2Q1KMD3 747 aaKnown RBP6.83□□□□□ -1.32
DEPDC1-202ENST00000456315 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
DEPDC1-202ENST00000456315 GOLGB1Q14789 3259 aaKnown RBP6.8□□□□□ -1.32
DEPDC1-202ENST00000456315 RUSC2Q8N2Y8 1516 aa6.79□□□□□ -1.32
DEPDC1-202ENST00000456315 CECR2Q9BXF3 1484 aa6.76□□□□□ -1.33
DEPDC1-202ENST00000456315 USP34Q70CQ2 3546 aa6.75□□□□□ -1.33
DEPDC1-202ENST00000456315 SALL2Q9Y467 1007 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1-202ENST00000456315 SOGA1O94964 1423 aa6.74□□□□□ -1.33
DEPDC1-202ENST00000456315 CCDC136Q96JN2 1154 aa6.74□□□□□ -1.33
DEPDC1-202ENST00000456315 CCDC88BA6NC98 1476 aa6.73□□□□□ -1.33
DEPDC1-202ENST00000456315 HIRIP3Q9BW71 556 aaPredicted RBP6.73□□□□□ -1.33
DEPDC1-202ENST00000456315 NACADO15069 1562 aa6.73□□□□□ -1.33
DEPDC1-202ENST00000456315 FKBP8Q14318 412 aa6.72□□□□□ -1.33
DEPDC1-202ENST00000456315 CEP162Q5TB80 1403 aa6.71□□□□□ -1.34
DEPDC1-202ENST00000456315 TRIM52Q96A61 297 aa6.71□□□□□ -1.34
DEPDC1-202ENST00000456315 PAK3O75914 559 aaPredicted RBP6.7□□□□□ -1.34
DEPDC1-202ENST00000456315 WRNQ14191 1432 aaPredicted RBP eCLIP6.7□□□□□ -1.34
DEPDC1-202ENST00000456315 IRX6P78412 446 aaPredicted RBP6.69□□□□□ -1.34
DEPDC1-202ENST00000456315 ABCC8Q09428 1581 aa6.69□□□□□ -1.34
DEPDC1-202ENST00000456315 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
DEPDC1-202ENST00000456315 ABCC9O60706 1549 aa6.67□□□□□ -1.34
DEPDC1-202ENST00000456315 DHX57Q6P158 1386 aaKnown RBP6.66□□□□□ -1.34
DEPDC1-202ENST00000456315 PCNTO95613 3336 aa6.65□□□□□ -1.34
DEPDC1-202ENST00000456315 DNAJC5BQ9UF47 199 aa6.65□□□□□ -1.34
DEPDC1-202ENST00000456315 MROH2BQ7Z745 1585 aa6.65□□□□□ -1.35
DEPDC1-202ENST00000456315 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
DEPDC1-202ENST00000456315 KANK4Q5T7N3 995 aaPredicted RBP6.63□□□□□ -1.35
DEPDC1-202ENST00000456315 DDX10Q13206 875 aaKnown RBP6.63□□□□□ -1.35
DEPDC1-202ENST00000456315 SIN3AQ96ST3 1273 aa6.62□□□□□ -1.35
DEPDC1-202ENST00000456315 RANGAP1P46060 587 aaPredicted RBP6.62□□□□□ -1.35
DEPDC1-202ENST00000456315 DEKP35659 375 aaKnown RBP6.6□□□□□ -1.35
DEPDC1-202ENST00000456315 RTN4Q9NQC3 1192 aaKnown RBP6.6□□□□□ -1.35
DEPDC1-202ENST00000456315 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.59□□□□□ -1.35
DEPDC1-202ENST00000456315 EIF4G1Q04637 1599 aaKnown RBP6.59□□□□□ -1.36
DEPDC1-202ENST00000456315 SENP3-EIF4A1A0A087X0R7 540 aa6.58□□□□□ -1.36
DEPDC1-202ENST00000456315 UBTFP17480 764 aaKnown RBP6.58□□□□□ -1.36
DEPDC1-202ENST00000456315 WIZO95785 1651 aa6.58□□□□□ -1.36
DEPDC1-202ENST00000456315 PPP1R15AO75807 674 aaPredicted RBP6.58□□□□□ -1.36
DEPDC1-202ENST00000456315 CLIP1P30622 1438 aa6.57□□□□□ -1.36
DEPDC1-202ENST00000456315 SRCAPQ6ZRS2 3230 aa6.57□□□□□ -1.36
DEPDC1-202ENST00000456315 BAZ1BQ9UIG0 1483 aaKnown RBP6.57□□□□□ -1.36
DEPDC1-202ENST00000456315 DNAJC5Q9H3Z4 198 aa6.57□□□□□ -1.36
DEPDC1-202ENST00000456315 TNIKQ9UKE5 1360 aa6.57□□□□□ -1.36
DEPDC1-202ENST00000456315 CUX2O14529 1486 aa6.57□□□□□ -1.36
DEPDC1-202ENST00000456315 APLP2Q06481 763 aa6.56□□□□□ -1.36
DEPDC1-202ENST00000456315 SCRIBQ14160 1630 aa6.55□□□□□ -1.36
DEPDC1-202ENST00000456315 NBR1Q14596 966 aa6.54□□□□□ -1.36
DEPDC1-202ENST00000456315 FANCIQ9NVI1 1328 aa6.53□□□□□ -1.36
DEPDC1-202ENST00000456315 B4GALNT3Q6L9W6 998 aa6.53□□□□□ -1.36
DEPDC1-202ENST00000456315 SKAP1Q86WV1 359 aa6.52□□□□□ -1.37
DEPDC1-202ENST00000456315 WDR97A6NE52 1622 aa6.52□□□□□ -1.37
DEPDC1-202ENST00000456315 C11orf95C9JLR9 678 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms