RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 PELP1Q8IZL8 1130 aaKnown RBP7.04□□□□□ -1.28
DMD-230ENST00000620040 MYT1Q01538 1121 aa7.02□□□□□ -1.29
DMD-230ENST00000620040 NISCHQ9Y2I1 1504 aa6.88□□□□□ -1.31
DMD-230ENST00000620040 CCER1Q8TC90 406 aaPredicted RBP6.67□□□□□ -1.34
DMD-230ENST00000620040 ERICH6Q7L0X2 663 aa6.62□□□□□ -1.35
DMD-230ENST00000620040 CENPBP07199 599 aaPredicted RBP6.6□□□□□ -1.35
DMD-230ENST00000620040 TTBK1Q5TCY1 1321 aaPredicted RBP6.52□□□□□ -1.37
DMD-230ENST00000620040 ZEB1P37275 1124 aaPredicted RBP6.5□□□□□ -1.37
DMD-230ENST00000620040 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
DMD-230ENST00000620040 NEFLP07196 543 aa6.38□□□□□ -1.39
DMD-230ENST00000620040 HRCP23327 699 aa6.37□□□□□ -1.39
DMD-230ENST00000620040 DCAF8L2P0C7V8 631 aa6.36□□□□□ -1.39
DMD-230ENST00000620040 SUPT5HO00267 1087 aaKnown RBP6.33□□□□□ -1.4
DMD-230ENST00000620040 APLP2Q06481 763 aa6.33□□□□□ -1.4
DMD-230ENST00000620040 PCGF6Q9BYE7 350 aa6.27□□□□□ -1.41
DMD-230ENST00000620040 DAXXQ9UER7 740 aaPredicted RBP6.25□□□□□ -1.41
DMD-230ENST00000620040 EHMT2Q96KQ7 1210 aa6.22□□□□□ -1.41
DMD-230ENST00000620040 CCDC180Q9P1Z9 1646 aa6.21□□□□□ -1.42
DMD-230ENST00000620040 RTL5Q5HYW3 569 aaPredicted RBP6.2□□□□□ -1.42
DMD-230ENST00000620040 FAM9AQ8IZU1 332 aaPredicted RBP6.14□□□□□ -1.43
DMD-230ENST00000620040 GLIPR1L2Q4G1C9 344 aa6.14□□□□□ -1.43
DMD-230ENST00000620040 DCAF1Q9Y4B6 1507 aa6.11□□□□□ -1.43
DMD-230ENST00000620040 ZNF316A6NFI3 1004 aaPredicted RBP6.09□□□□□ -1.44
DMD-230ENST00000620040 MYT1LQ9UL68 1186 aa6.09□□□□□ -1.44
DMD-230ENST00000620040 TRIM26Q12899 539 aaPredicted RBP6.08□□□□□ -1.44
DMD-230ENST00000620040 SHROOM4Q9ULL8 1493 aa6.07□□□□□ -1.44
DMD-230ENST00000620040 CLSPNQ9HAW4 1339 aa6.04□□□□□ -1.44
DMD-230ENST00000620040 PPARGC1BQ86YN6 1023 aaKnown RBP6.02□□□□□ -1.45
DMD-230ENST00000620040 MYO15BQ96JP2 1530 aa5.98□□□□□ -1.45
DMD-230ENST00000620040 ACIN1Q9UKV3 1341 aaKnown RBP5.98□□□□□ -1.45
DMD-230ENST00000620040 SCAF1Q9H7N4 1312 aaKnown RBP5.95□□□□□ -1.46
DMD-230ENST00000620040 CDK11AQ9UQ88 783 aaPredicted RBP5.95□□□□□ -1.46
DMD-230ENST00000620040 TRIM41Q8WV44 630 aa5.94□□□□□ -1.46
DMD-230ENST00000620040 DIEXFQ68CQ4 756 aaKnown RBP5.94□□□□□ -1.46
DMD-230ENST00000620040 GTF3C3Q9Y5Q9 886 aa5.92□□□□□ -1.46
DMD-230ENST00000620040 ANP32AP39687 249 aaKnown RBP5.91□□□□□ -1.46
DMD-230ENST00000620040 EIF5BO60841 1220 aaKnown RBP5.91□□□□□ -1.46
DMD-230ENST00000620040 ANP32BQ92688 251 aaKnown RBP5.89□□□□□ -1.47
DMD-230ENST00000620040 CHIC1Q5VXU3 224 aa5.89□□□□□ -1.47
DMD-230ENST00000620040 UBTFP17480 764 aaKnown RBP5.86□□□□□ -1.47
DMD-230ENST00000620040 TNNT2P45379 298 aaPredicted RBP5.82□□□□□ -1.48
DMD-230ENST00000620040 ZCCHC6Q5VYS8 1495 aaKnown RBP5.8□□□□□ -1.48
DMD-230ENST00000620040 BCL11AQ9H165 835 aa5.8□□□□□ -1.48
DMD-230ENST00000620040 ZBTB47Q9UFB7 747 aaPredicted RBP5.79□□□□□ -1.48
DMD-230ENST00000620040 ATP1B4Q9UN42 357 aaPredicted RBP5.79□□□□□ -1.48
DMD-230ENST00000620040 NEUROD1Q13562 356 aa5.78□□□□□ -1.48
DMD-230ENST00000620040 RANGAP1P46060 587 aaPredicted RBP5.78□□□□□ -1.48
DMD-230ENST00000620040 ANP32EQ9BTT0 268 aa5.78□□□□□ -1.48
DMD-230ENST00000620040 ANP32CO43423 234 aa5.78□□□□□ -1.48
DMD-230ENST00000620040 BCANQ96GW7 911 aa5.76□□□□□ -1.49
DMD-230ENST00000620040 TRIM44Q96DX7 344 aaPredicted RBP5.76□□□□□ -1.49
DMD-230ENST00000620040 UPF2Q9HAU5 1272 aaKnown RBP5.75□□□□□ -1.49
DMD-230ENST00000620040 NCLP19338 710 aaKnown RBP5.74□□□□□ -1.49
DMD-230ENST00000620040 POLR3GLQ9BT43 218 aa5.74□□□□□ -1.49
DMD-230ENST00000620040 NACADO15069 1562 aa5.74□□□□□ -1.49
DMD-230ENST00000620040 EEA1Q15075 1411 aa5.73□□□□□ -1.49
DMD-230ENST00000620040 ERICH6BQ5W0A0 696 aa5.72□□□□□ -1.49
DMD-230ENST00000620040 CDK11BP21127 795 aaKnown RBP5.71□□□□□ -1.5
DMD-230ENST00000620040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.7□□□□□ -1.5
DMD-230ENST00000620040 CANXP27824 592 aaKnown RBP5.7□□□□□ -1.5
DMD-230ENST00000620040 HSP90AA1P07900 732 aaKnown RBP5.7□□□□□ -1.5
DMD-230ENST00000620040 HNRNPUL2Q1KMD3 747 aaKnown RBP5.69□□□□□ -1.5
DMD-230ENST00000620040 NEFMP07197 916 aa5.69□□□□□ -1.5
DMD-230ENST00000620040 DDRGK1Q96HY6 314 aa5.68□□□□□ -1.5
DMD-230ENST00000620040 NPM2Q86SE8 214 aaKnown RBP5.67□□□□□ -1.5
DMD-230ENST00000620040 LOC105371045A0A1W2PR82 267 aa5.66□□□□□ -1.5
DMD-230ENST00000620040 NBR1Q14596 966 aa5.65□□□□□ -1.5
DMD-230ENST00000620040 FKBP8Q14318 412 aa5.65□□□□□ -1.5
DMD-230ENST00000620040 ITGAEP38570 1179 aa5.65□□□□□ -1.5
DMD-230ENST00000620040 CNGB1Q14028 1251 aaPredicted RBP5.65□□□□□ -1.51
DMD-230ENST00000620040 RTN4Q9NQC3 1192 aaKnown RBP5.64□□□□□ -1.51
DMD-230ENST00000620040 BECN1Q14457 450 aa5.63□□□□□ -1.51
DMD-230ENST00000620040 PPM1GO15355 546 aaPredicted RBP5.63□□□□□ -1.51
DMD-230ENST00000620040 AMER1Q5JTC6 1135 aaPredicted RBP5.62□□□□□ -1.51
DMD-230ENST00000620040 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.62□□□□□ -1.51
DMD-230ENST00000620040 GOLGA6L22H0YM25 854 aa5.61□□□□□ -1.51
DMD-230ENST00000620040 SLC4A1APQ9BWU0 796 aaKnown RBP5.61□□□□□ -1.51
DMD-230ENST00000620040 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.6□□□□□ -1.51
DMD-230ENST00000620040 NAP1L5Q96NT1 182 aaPredicted RBP5.6□□□□□ -1.51
DMD-230ENST00000620040 CCDC136Q96JN2 1154 aa5.6□□□□□ -1.51
DMD-230ENST00000620040 RB1CC1Q8TDY2 1594 aa5.6□□□□□ -1.51
DMD-230ENST00000620040 BAZ1BQ9UIG0 1483 aaKnown RBP5.58□□□□□ -1.52
DMD-230ENST00000620040 PRKCSHP14314 528 aaPredicted RBP5.58□□□□□ -1.52
DMD-230ENST00000620040 ABCC9O60706 1549 aa5.57□□□□□ -1.52
DMD-230ENST00000620040 CHAF1AQ13111 956 aaPredicted RBP5.56□□□□□ -1.52
DMD-230ENST00000620040 L1TD1Q5T7N2 865 aaKnown RBP5.56□□□□□ -1.52
DMD-230ENST00000620040 DNTTIP2Q5QJE6 756 aaKnown RBP5.55□□□□□ -1.52
DMD-230ENST00000620040 HNRNPUQ00839 825 aaKnown RBP eCLIP5.55□□□□□ -1.52
DMD-230ENST00000620040 FAM50AQ14320 339 aaKnown RBP5.55□□□□□ -1.52
DMD-230ENST00000620040 GOLGA6L6A8MZA4 724 aa5.55□□□□□ -1.52
DMD-230ENST00000620040 PTMAP06454 111 aaKnown RBP5.55□□□□□ -1.52
DMD-230ENST00000620040 SUPT16HQ9Y5B9 1047 aaKnown RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 BAZ1AQ9NRL2 1556 aaPredicted RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 TRIM52Q96A61 297 aa5.54□□□□□ -1.52
DMD-230ENST00000620040 CSRNP3Q8WYN3 585 aa5.54□□□□□ -1.52
DMD-230ENST00000620040 NOP58Q9Y2X3 529 aaKnown RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 ZNF326Q5BKZ1 582 aaKnown RBP5.54□□□□□ -1.52
DMD-230ENST00000620040 ARXQ96QS3 562 aa5.54□□□□□ -1.52
DMD-230ENST00000620040 SLC24A1O60721 1099 aa5.52□□□□□ -1.53
DMD-230ENST00000620040 NRDCO43847 1150 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms