RNA–Protein interactions for RNA: ENST00000619831.4

DMD-229, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-229ENST00000619831 EHMT2Q96KQ7 1210 aa7.53□□□□□ -1.2
DMD-229ENST00000619831 DCAF8L2P0C7V8 631 aa7.39□□□□□ -1.23
DMD-229ENST00000619831 SUPT5HO00267 1087 aaKnown RBP7.38□□□□□ -1.23
DMD-229ENST00000619831 SHROOM4Q9ULL8 1493 aa7.34□□□□□ -1.23
DMD-229ENST00000619831 TTBK1Q5TCY1 1321 aaPredicted RBP7.28□□□□□ -1.24
DMD-229ENST00000619831 PCGF6Q9BYE7 350 aa7.25□□□□□ -1.25
DMD-229ENST00000619831 YTHDC1Q96MU7 727 aaKnown RBP7.15□□□□□ -1.26
DMD-229ENST00000619831 PPARGC1BQ86YN6 1023 aaKnown RBP7.15□□□□□ -1.26
DMD-229ENST00000619831 MYT1Q01538 1121 aa7.05□□□□□ -1.28
DMD-229ENST00000619831 FAM9AQ8IZU1 332 aaPredicted RBP7.05□□□□□ -1.28
DMD-229ENST00000619831 PELP1Q8IZL8 1130 aaKnown RBP7.04□□□□□ -1.28
DMD-229ENST00000619831 NISCHQ9Y2I1 1504 aa7.02□□□□□ -1.29
DMD-229ENST00000619831 RANGAP1P46060 587 aaPredicted RBP6.93□□□□□ -1.3
DMD-229ENST00000619831 ERICH6Q7L0X2 663 aa6.91□□□□□ -1.3
DMD-229ENST00000619831 HRCP23327 699 aa6.87□□□□□ -1.31
DMD-229ENST00000619831 CCER1Q8TC90 406 aaPredicted RBP6.85□□□□□ -1.31
DMD-229ENST00000619831 CENPBP07199 599 aaPredicted RBP6.84□□□□□ -1.31
DMD-229ENST00000619831 LOC105371045A0A1W2PR82 267 aa6.79□□□□□ -1.32
DMD-229ENST00000619831 BCANQ96GW7 911 aa6.76□□□□□ -1.33
DMD-229ENST00000619831 CNGB1Q14028 1251 aaPredicted RBP6.75□□□□□ -1.33
DMD-229ENST00000619831 GTF3C3Q9Y5Q9 886 aa6.73□□□□□ -1.33
DMD-229ENST00000619831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.69□□□□□ -1.34
DMD-229ENST00000619831 SCAF1Q9H7N4 1312 aaKnown RBP6.65□□□□□ -1.34
DMD-229ENST00000619831 ZEB1P37275 1124 aaPredicted RBP6.63□□□□□ -1.35
DMD-229ENST00000619831 NEFLP07196 543 aa6.62□□□□□ -1.35
DMD-229ENST00000619831 TRIM26Q12899 539 aaPredicted RBP6.61□□□□□ -1.35
DMD-229ENST00000619831 APLP2Q06481 763 aa6.6□□□□□ -1.35
DMD-229ENST00000619831 ATP1B4Q9UN42 357 aaPredicted RBP6.6□□□□□ -1.35
DMD-229ENST00000619831 HNRNPUL2Q1KMD3 747 aaKnown RBP6.6□□□□□ -1.35
DMD-229ENST00000619831 DIEXFQ68CQ4 756 aaKnown RBP6.59□□□□□ -1.35
DMD-229ENST00000619831 ITGAEP38570 1179 aa6.58□□□□□ -1.36
DMD-229ENST00000619831 TRIM41Q8WV44 630 aa6.58□□□□□ -1.36
DMD-229ENST00000619831 POLR3GLQ9BT43 218 aa6.57□□□□□ -1.36
DMD-229ENST00000619831 ACIN1Q9UKV3 1341 aaKnown RBP6.52□□□□□ -1.37
DMD-229ENST00000619831 UBTFP17480 764 aaKnown RBP6.52□□□□□ -1.37
DMD-229ENST00000619831 NEUROD1Q13562 356 aa6.51□□□□□ -1.37
DMD-229ENST00000619831 CHIC1Q5VXU3 224 aa6.5□□□□□ -1.37
DMD-229ENST00000619831 NBR1Q14596 966 aa6.44□□□□□ -1.38
DMD-229ENST00000619831 EIF5BO60841 1220 aaKnown RBP6.44□□□□□ -1.38
DMD-229ENST00000619831 NPM2Q86SE8 214 aaKnown RBP6.43□□□□□ -1.38
DMD-229ENST00000619831 IRX6P78412 446 aaPredicted RBP6.42□□□□□ -1.38
DMD-229ENST00000619831 RTN4Q9NQC3 1192 aaKnown RBP6.41□□□□□ -1.38
DMD-229ENST00000619831 BCL11AQ9H165 835 aa6.41□□□□□ -1.38
DMD-229ENST00000619831 SENP3-EIF4A1A0A087X0R7 540 aa6.4□□□□□ -1.38
DMD-229ENST00000619831 MYO15BQ96JP2 1530 aa6.4□□□□□ -1.39
DMD-229ENST00000619831 RTL5Q5HYW3 569 aaPredicted RBP6.39□□□□□ -1.39
DMD-229ENST00000619831 ARXQ96QS3 562 aa6.39□□□□□ -1.39
DMD-229ENST00000619831 DAXXQ9UER7 740 aaPredicted RBP6.39□□□□□ -1.39
DMD-229ENST00000619831 FKBP8Q14318 412 aa6.37□□□□□ -1.39
DMD-229ENST00000619831 ZNF316A6NFI3 1004 aaPredicted RBP6.34□□□□□ -1.39
DMD-229ENST00000619831 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.32□□□□□ -1.4
DMD-229ENST00000619831 CCDC180Q9P1Z9 1646 aa6.3□□□□□ -1.4
DMD-229ENST00000619831 MIER1Q8N108 512 aa6.3□□□□□ -1.4
DMD-229ENST00000619831 CDK11AQ9UQ88 783 aaPredicted RBP6.3□□□□□ -1.4
DMD-229ENST00000619831 DCAF1Q9Y4B6 1507 aa6.3□□□□□ -1.4
DMD-229ENST00000619831 CLSPNQ9HAW4 1339 aa6.28□□□□□ -1.4
DMD-229ENST00000619831 HIRIP3Q9BW71 556 aaPredicted RBP6.27□□□□□ -1.41
DMD-229ENST00000619831 CCDC136Q96JN2 1154 aa6.26□□□□□ -1.41
DMD-229ENST00000619831 FAM50AQ14320 339 aaKnown RBP6.25□□□□□ -1.41
DMD-229ENST00000619831 ZNF326Q5BKZ1 582 aaKnown RBP6.25□□□□□ -1.41
DMD-229ENST00000619831 TRIM52Q96A61 297 aa6.25□□□□□ -1.41
DMD-229ENST00000619831 CSRNP3Q8WYN3 585 aa6.24□□□□□ -1.41
DMD-229ENST00000619831 SLC4A1APQ9BWU0 796 aaKnown RBP6.24□□□□□ -1.41
DMD-229ENST00000619831 ANP32EQ9BTT0 268 aa6.23□□□□□ -1.41
DMD-229ENST00000619831 SALL2Q9Y467 1007 aaPredicted RBP6.23□□□□□ -1.41
DMD-229ENST00000619831 AMER1Q5JTC6 1135 aaPredicted RBP6.22□□□□□ -1.41
DMD-229ENST00000619831 ARID4BQ4LE39 1312 aaPredicted RBP6.2□□□□□ -1.42
DMD-229ENST00000619831 LAS1LQ9Y4W2 734 aaKnown RBP6.19□□□□□ -1.42
DMD-229ENST00000619831 DDX10Q13206 875 aaKnown RBP6.19□□□□□ -1.42
DMD-229ENST00000619831 ARID3CA6NKF2 412 aa6.17□□□□□ -1.42
DMD-229ENST00000619831 FAM9BQ8IZU0 186 aa6.17□□□□□ -1.42
DMD-229ENST00000619831 ANP32CO43423 234 aa6.16□□□□□ -1.42
DMD-229ENST00000619831 ANP32AP39687 249 aaKnown RBP6.16□□□□□ -1.42
DMD-229ENST00000619831 SUPT16HQ9Y5B9 1047 aaKnown RBP6.15□□□□□ -1.43
DMD-229ENST00000619831 HNRNPUQ00839 825 aaKnown RBP eCLIP6.14□□□□□ -1.43
DMD-229ENST00000619831 ARID3AQ99856 593 aa6.14□□□□□ -1.43
DMD-229ENST00000619831 ZBTB7CA1YPR0 619 aa6.14□□□□□ -1.43
DMD-229ENST00000619831 GLIPR1L2Q4G1C9 344 aa6.14□□□□□ -1.43
DMD-229ENST00000619831 TPRNQ4KMQ1 711 aa6.12□□□□□ -1.43
DMD-229ENST00000619831 DEKP35659 375 aaKnown RBP6.12□□□□□ -1.43
DMD-229ENST00000619831 P3H3Q8IVL6 736 aa6.11□□□□□ -1.43
DMD-229ENST00000619831 MYT1LQ9UL68 1186 aa6.1□□□□□ -1.43
DMD-229ENST00000619831 SENP3Q9H4L4 574 aaPredicted RBP6.09□□□□□ -1.43
DMD-229ENST00000619831 CANXP27824 592 aaKnown RBP6.08□□□□□ -1.44
DMD-229ENST00000619831 ZBTB47Q9UFB7 747 aaPredicted RBP6.07□□□□□ -1.44
DMD-229ENST00000619831 TSHZ2Q9NRE2 1034 aa6.07□□□□□ -1.44
DMD-229ENST00000619831 NAP1L5Q96NT1 182 aaPredicted RBP6.05□□□□□ -1.44
DMD-229ENST00000619831 B4GALNT3Q6L9W6 998 aa6.04□□□□□ -1.44
DMD-229ENST00000619831 KCNH8Q96L42 1107 aa6.04□□□□□ -1.44
DMD-229ENST00000619831 RBM19Q9Y4C8 960 aaKnown RBP6.03□□□□□ -1.44
DMD-229ENST00000619831 SPRYD3Q8NCJ5 442 aa6.03□□□□□ -1.44
DMD-229ENST00000619831 SLC24A1O60721 1099 aa6.03□□□□□ -1.44
DMD-229ENST00000619831 TIMELESSQ9UNS1 1208 aa6.02□□□□□ -1.45
DMD-229ENST00000619831 ANO8Q9HCE9 1232 aaPredicted RBP6.02□□□□□ -1.45
DMD-229ENST00000619831 NEFMP07197 916 aa6.02□□□□□ -1.45
DMD-229ENST00000619831 BAZ1BQ9UIG0 1483 aaKnown RBP6.01□□□□□ -1.45
DMD-229ENST00000619831 NOP58Q9Y2X3 529 aaKnown RBP6□□□□□ -1.45
DMD-229ENST00000619831 PRKCSHP14314 528 aaPredicted RBP5.98□□□□□ -1.45
DMD-229ENST00000619831 CHIC2Q9UKJ5 165 aa5.96□□□□□ -1.46
DMD-229ENST00000619831 ZCCHC6Q5VYS8 1495 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms