RNA–Protein interactions for RNA: ENST00000638730.1

RGPD2-203, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RGPD2, Length 5,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-203ENST00000638730 NISCHQ9Y2I1 1504 aa12.68□□□□□ -0.38
RGPD2-203ENST00000638730 CCDC180Q9P1Z9 1646 aa10.88□□□□□ -0.67
RGPD2-203ENST00000638730 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
RGPD2-203ENST00000638730 MYO15BQ96JP2 1530 aa10.8□□□□□ -0.68
RGPD2-203ENST00000638730 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
RGPD2-203ENST00000638730 SHROOM4Q9ULL8 1493 aa10.51□□□□□ -0.73
RGPD2-203ENST00000638730 ABCC9O60706 1549 aa10.36□□□□□ -0.75
RGPD2-203ENST00000638730 CHIC1Q5VXU3 224 aa10.35□□□□□ -0.75
RGPD2-203ENST00000638730 HRCP23327 699 aa10.34□□□□□ -0.75
RGPD2-203ENST00000638730 EIF4G1Q04637 1599 aaKnown RBP10.23□□□□□ -0.77
RGPD2-203ENST00000638730 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.78
RGPD2-203ENST00000638730 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
RGPD2-203ENST00000638730 RB1CC1Q8TDY2 1594 aa10.14□□□□□ -0.79
RGPD2-203ENST00000638730 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
RGPD2-203ENST00000638730 SCRIBQ14160 1630 aa10□□□□□ -0.81
RGPD2-203ENST00000638730 PCGF6Q9BYE7 350 aa9.99□□□□□ -0.81
RGPD2-203ENST00000638730 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
RGPD2-203ENST00000638730 NACADO15069 1562 aa9.97□□□□□ -0.81
RGPD2-203ENST00000638730 WIZO95785 1651 aa9.94□□□□□ -0.82
RGPD2-203ENST00000638730 UNC13AQ9UPW8 1703 aa9.92□□□□□ -0.82
RGPD2-203ENST00000638730 BAZ1AQ9NRL2 1556 aaPredicted RBP9.9□□□□□ -0.82
RGPD2-203ENST00000638730 MROH2BQ7Z745 1585 aa9.9□□□□□ -0.82
RGPD2-203ENST00000638730 CECR2Q9BXF3 1484 aa9.86□□□□□ -0.83
RGPD2-203ENST00000638730 TRIM26Q12899 539 aaPredicted RBP9.82□□□□□ -0.84
RGPD2-203ENST00000638730 SCAF1Q9H7N4 1312 aaKnown RBP9.76□□□□□ -0.85
RGPD2-203ENST00000638730 SMARCA2P51531 1590 aa9.73□□□□□ -0.85
RGPD2-203ENST00000638730 TOP2AP11388 1531 aaKnown RBP9.7□□□□□ -0.86
RGPD2-203ENST00000638730 WRNQ14191 1432 aaPredicted RBP eCLIP9.69□□□□□ -0.86
RGPD2-203ENST00000638730 SMARCA4P51532 1647 aa9.69□□□□□ -0.86
RGPD2-203ENST00000638730 ABCC8Q09428 1581 aa9.68□□□□□ -0.86
RGPD2-203ENST00000638730 PEG3Q9GZU2 1588 aa9.64□□□□□ -0.87
RGPD2-203ENST00000638730 CCDC88BA6NC98 1476 aa9.64□□□□□ -0.87
RGPD2-203ENST00000638730 BICRAQ9NZM4 1560 aa9.59□□□□□ -0.87
RGPD2-203ENST00000638730 RUSC2Q8N2Y8 1516 aa9.57□□□□□ -0.88
RGPD2-203ENST00000638730 DCAF8L2P0C7V8 631 aa9.55□□□□□ -0.88
RGPD2-203ENST00000638730 SYNJ1O43426 1573 aa9.55□□□□□ -0.88
RGPD2-203ENST00000638730 KIF21BO75037 1637 aa9.55□□□□□ -0.88
RGPD2-203ENST00000638730 SOGA1O94964 1423 aa9.52□□□□□ -0.89
RGPD2-203ENST00000638730 ZEB1P37275 1124 aaPredicted RBP9.51□□□□□ -0.89
RGPD2-203ENST00000638730 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
RGPD2-203ENST00000638730 CEP162Q5TB80 1403 aa9.48□□□□□ -0.89
RGPD2-203ENST00000638730 BIVM-ERCC5R4GMW8 1640 aa9.46□□□□□ -0.89
RGPD2-203ENST00000638730 NEUROD1Q13562 356 aa9.46□□□□□ -0.89
RGPD2-203ENST00000638730 TNIKQ9UKE5 1360 aa9.44□□□□□ -0.9
RGPD2-203ENST00000638730 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
RGPD2-203ENST00000638730 TOP2BQ02880 1626 aa9.38□□□□□ -0.91
RGPD2-203ENST00000638730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
RGPD2-203ENST00000638730 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
RGPD2-203ENST00000638730 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
RGPD2-203ENST00000638730 PELP1Q8IZL8 1130 aaKnown RBP9.35□□□□□ -0.91
RGPD2-203ENST00000638730 EEA1Q15075 1411 aa9.34□□□□□ -0.91
RGPD2-203ENST00000638730 CUX2O14529 1486 aa9.33□□□□□ -0.92
RGPD2-203ENST00000638730 GOLGA3Q08378 1498 aa9.33□□□□□ -0.92
RGPD2-203ENST00000638730 BAZ1BQ9UIG0 1483 aaKnown RBP9.33□□□□□ -0.92
RGPD2-203ENST00000638730 ARAP1Q96P48 1450 aa9.32□□□□□ -0.92
RGPD2-203ENST00000638730 CLIP1P30622 1438 aa9.3□□□□□ -0.92
RGPD2-203ENST00000638730 RAPGEF2Q9Y4G8 1499 aa9.3□□□□□ -0.92
RGPD2-203ENST00000638730 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
RGPD2-203ENST00000638730 CEP164Q9UPV0 1460 aa9.26□□□□□ -0.93
RGPD2-203ENST00000638730 PRXQ9BXM0 1461 aa9.25□□□□□ -0.93
RGPD2-203ENST00000638730 VPS8Q8N3P4 1428 aa9.25□□□□□ -0.93
RGPD2-203ENST00000638730 MAPKBP1O60336 1514 aa9.25□□□□□ -0.93
RGPD2-203ENST00000638730 LRRIQ1Q96JM4 1722 aa9.24□□□□□ -0.93
RGPD2-203ENST00000638730 ATAD2BQ9ULI0 1458 aa9.24□□□□□ -0.93
RGPD2-203ENST00000638730 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
RGPD2-203ENST00000638730 DIEXFQ68CQ4 756 aaKnown RBP9.23□□□□□ -0.93
RGPD2-203ENST00000638730 CUX1P39880 1505 aa9.22□□□□□ -0.93
RGPD2-203ENST00000638730 CFAP43Q8NDM7 1665 aa9.21□□□□□ -0.94
RGPD2-203ENST00000638730 RRBP1Q9P2E9 1410 aaKnown RBP9.21□□□□□ -0.94
RGPD2-203ENST00000638730 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
RGPD2-203ENST00000638730 DHX57Q6P158 1386 aaKnown RBP9.18□□□□□ -0.94
RGPD2-203ENST00000638730 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
RGPD2-203ENST00000638730 HMGXB3Q12766 1538 aa9.15□□□□□ -0.94
RGPD2-203ENST00000638730 MIER1Q8N108 512 aa9.15□□□□□ -0.94
RGPD2-203ENST00000638730 KDM5BQ9UGL1 1544 aa9.15□□□□□ -0.94
RGPD2-203ENST00000638730 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.94
RGPD2-203ENST00000638730 CCER1Q8TC90 406 aaPredicted RBP9.14□□□□□ -0.95
RGPD2-203ENST00000638730 ARHGAP35Q9NRY4 1499 aa9.12□□□□□ -0.95
RGPD2-203ENST00000638730 WDR97A6NE52 1622 aa9.12□□□□□ -0.95
RGPD2-203ENST00000638730 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
RGPD2-203ENST00000638730 TIAM1Q13009 1591 aa9.09□□□□□ -0.95
RGPD2-203ENST00000638730 CFTRP13569 1480 aa9.04□□□□□ -0.96
RGPD2-203ENST00000638730 PCF11O94913 1555 aaKnown RBP9.04□□□□□ -0.96
RGPD2-203ENST00000638730 KANK4Q5T7N3 995 aaPredicted RBP9.03□□□□□ -0.96
RGPD2-203ENST00000638730 CTTNBP2Q8WZ74 1663 aa9.03□□□□□ -0.96
RGPD2-203ENST00000638730 NCAPD3P42695 1498 aa9.02□□□□□ -0.97
RGPD2-203ENST00000638730 DENND4BO75064 1496 aaPredicted RBP9.01□□□□□ -0.97
RGPD2-203ENST00000638730 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
RGPD2-203ENST00000638730 POLR1AO95602 1720 aaPredicted RBP8.99□□□□□ -0.97
RGPD2-203ENST00000638730 SUPT16HQ9Y5B9 1047 aaKnown RBP8.98□□□□□ -0.97
RGPD2-203ENST00000638730 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
RGPD2-203ENST00000638730 SAMD9Q5K651 1589 aa8.97□□□□□ -0.97
RGPD2-203ENST00000638730 ARHGEF11O15085 1522 aa8.96□□□□□ -0.98
RGPD2-203ENST00000638730 LRRC9Q6ZRR7 1453 aa8.96□□□□□ -0.98
RGPD2-203ENST00000638730 SNAPC4Q5SXM2 1469 aa8.95□□□□□ -0.98
RGPD2-203ENST00000638730 CENPBP07199 599 aaPredicted RBP8.95□□□□□ -0.98
RGPD2-203ENST00000638730 KCNH8Q96L42 1107 aa8.95□□□□□ -0.98
RGPD2-203ENST00000638730 GCC2Q8IWJ2 1684 aa8.94□□□□□ -0.98
RGPD2-203ENST00000638730 KDM6BO15054 1643 aa8.93□□□□□ -0.98
RGPD2-203ENST00000638730 PHLDB1Q86UU1 1377 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms