RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 POTEDQ86YR6 584 aa4.7□□□□□ -1.66
RNU6-258P-201ENST00000390884 AEBP2Q6ZN18 517 aaPredicted RBP3.75□□□□□ -1.81
RNU6-258P-201ENST00000390884 CHIC1Q5VXU3 224 aa3.68□□□□□ -1.82
RNU6-258P-201ENST00000390884 POTEHQ6S545 545 aa3.56□□□□□ -1.84
RNU6-258P-201ENST00000390884 CACNB1Q02641 598 aaPredicted RBP3.52□□□□□ -1.85
RNU6-258P-201ENST00000390884 SENP3Q9H4L4 574 aaPredicted RBP3.5□□□□□ -1.85
RNU6-258P-201ENST00000390884 MSH5O43196 834 aa3.48□□□□□ -1.85
RNU6-258P-201ENST00000390884 PLSCR2Q9NRY7 297 aa3.4□□□□□ -1.87
RNU6-258P-201ENST00000390884 PHF23Q9BUL5 403 aaPredicted RBP3.27□□□□□ -1.89
RNU6-258P-201ENST00000390884 FOXD1Q16676 465 aa3.25□□□□□ -1.89
RNU6-258P-201ENST00000390884 SP7Q8TDD2 431 aaPredicted RBP2.96□□□□□ -1.94
RNU6-258P-201ENST00000390884 PIAS4Q8N2W9 510 aaPredicted RBP2.94□□□□□ -1.94
RNU6-258P-201ENST00000390884 RNF39Q9H2S5 420 aa2.81□□□□□ -1.96
RNU6-258P-201ENST00000390884 C1QBPQ07021 282 aaKnown RBP2.79□□□□□ -1.96
RNU6-258P-201ENST00000390884 LHX8Q68G74 356 aa2.78□□□□□ -1.96
RNU6-258P-201ENST00000390884 PCDH10Q9P2E7 1040 aa2.72□□□□□ -1.97
RNU6-258P-201ENST00000390884 POTEMA6NI47 508 aa2.68□□□□□ -1.98
RNU6-258P-201ENST00000390884 DCAF8L1A6NGE4 600 aa2.67□□□□□ -1.98
RNU6-258P-201ENST00000390884 POTEGQ6S5H5 508 aa2.63□□□□□ -1.99
RNU6-258P-201ENST00000390884 HAX1O00165 279 aa2.61□□□□□ -1.99
RNU6-258P-201ENST00000390884 CHRDL2Q6WN34 429 aa2.6□□□□□ -1.99
RNU6-258P-201ENST00000390884 DMRT2Q9Y5R5 561 aa2.59□□□□□ -1.99
RNU6-258P-201ENST00000390884 RBM42Q9BTD8 480 aaKnown RBP2.41□□□□□ -2.02
RNU6-258P-201ENST00000390884 MAPK8IP2Q13387 824 aaPredicted RBP2.39□□□□□ -2.03
RNU6-258P-201ENST00000390884 ADRA2BP18089 450 aa2.37□□□□□ -2.03
RNU6-258P-201ENST00000390884 CDAN1Q8IWY9 1227 aa2.37□□□□□ -2.03
RNU6-258P-201ENST00000390884 MMRN1Q13201 1228 aa2.36□□□□□ -2.03
RNU6-258P-201ENST00000390884 DSG3P32926 999 aa2.35□□□□□ -2.03
RNU6-258P-201ENST00000390884 PPP6R1Q9UPN7 881 aa2.35□□□□□ -2.03
RNU6-258P-201ENST00000390884 EVX2Q03828 476 aa2.33□□□□□ -2.04
RNU6-258P-201ENST00000390884 PIP4P2Q8N4L2 257 aa2.33□□□□□ -2.04
RNU6-258P-201ENST00000390884 SCAF1Q9H7N4 1312 aaKnown RBP2.33□□□□□ -2.04
RNU6-258P-201ENST00000390884 GABBR2O75899 941 aa2.32□□□□□ -2.04
RNU6-258P-201ENST00000390884 OTUD5Q96G74 571 aa2.3□□□□□ -2.04
RNU6-258P-201ENST00000390884 FAM163AQ96GL9 167 aaPredicted RBP2.3□□□□□ -2.04
RNU6-258P-201ENST00000390884 CAPN15O75808 1086 aa2.29□□□□□ -2.04
RNU6-258P-201ENST00000390884 SPNS2Q8IVW8 549 aa2.26□□□□□ -2.05
RNU6-258P-201ENST00000390884 DNAJC5BQ9UF47 199 aa2.25□□□□□ -2.05
RNU6-258P-201ENST00000390884 DCBLD2Q96PD2 775 aa2.21□□□□□ -2.06
RNU6-258P-201ENST00000390884 LOC100996750A0A140TA64 210 aa2.2□□□□□ -2.06
RNU6-258P-201ENST00000390884 KRTAP4-6Q9BYQ5 205 aa2.2□□□□□ -2.06
RNU6-258P-201ENST00000390884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU6-258P-201ENST00000390884 POTEIP0CG38 1075 aa2.17□□□□□ -2.06
RNU6-258P-201ENST00000390884 FXR2P51116 673 aaKnown RBP eCLIP2.16□□□□□ -2.06
RNU6-258P-201ENST00000390884 LCE2DQ5TA82 110 aaPredicted RBP2.16□□□□□ -2.06
RNU6-258P-201ENST00000390884 MAMSTRQ6ZN01 415 aa2.15□□□□□ -2.07
RNU6-258P-201ENST00000390884 HOXD11P31277 338 aaPredicted RBP2.14□□□□□ -2.07
RNU6-258P-201ENST00000390884 C19orf67A6NJJ6 358 aa2.13□□□□□ -2.07
RNU6-258P-201ENST00000390884 SPINK5Q9NQ38 1064 aaPredicted RBP2.13□□□□□ -2.07
RNU6-258P-201ENST00000390884 ABCB7O75027 752 aa2.11□□□□□ -2.07
RNU6-258P-201ENST00000390884 AKT1S1Q96B36 256 aa2.11□□□□□ -2.07
RNU6-258P-201ENST00000390884 CLCN6P51797 869 aa2.1□□□□□ -2.07
RNU6-258P-201ENST00000390884 POTEB2H3BUK9 544 aa2.08□□□□□ -2.08
RNU6-258P-201ENST00000390884 SCUBE2Q9NQ36 999 aa2.08□□□□□ -2.08
RNU6-258P-201ENST00000390884 REM2Q8IYK8 340 aaPredicted RBP2.06□□□□□ -2.08
RNU6-258P-201ENST00000390884 TRHP20396 242 aaPredicted RBP2.05□□□□□ -2.08
RNU6-258P-201ENST00000390884 PITPNM1O00562 1244 aa2.04□□□□□ -2.08
RNU6-258P-201ENST00000390884 PRKAR2AP13861 404 aaKnown RBP2.02□□□□□ -2.09
RNU6-258P-201ENST00000390884 ZNF219Q9P2Y4 722 aaPredicted RBP2.02□□□□□ -2.09
RNU6-258P-201ENST00000390884 IRX2Q9BZI1 471 aaPredicted RBP2.01□□□□□ -2.09
RNU6-258P-201ENST00000390884 RNF166Q96A37 237 aaPredicted RBP2□□□□□ -2.09
RNU6-258P-201ENST00000390884 XP32Q5T750 250 aa1.99□□□□□ -2.09
RNU6-258P-201ENST00000390884 APLP2Q06481 763 aa1.98□□□□□ -2.09
RNU6-258P-201ENST00000390884 PLPPR3Q6T4P5 718 aa1.98□□□□□ -2.09
RNU6-258P-201ENST00000390884 ST18O60284 1047 aa1.95□□□□□ -2.1
RNU6-258P-201ENST00000390884 RNF216Q9NWF9 866 aaPredicted RBP1.95□□□□□ -2.1
RNU6-258P-201ENST00000390884 SUZ12Q15022 739 aaKnown RBP1.94□□□□□ -2.1
RNU6-258P-201ENST00000390884 BTBD11A6QL63 1104 aa1.93□□□□□ -2.1
RNU6-258P-201ENST00000390884 TMEM121BQ9BXQ6 578 aaPredicted RBP1.93□□□□□ -2.1
RNU6-258P-201ENST00000390884 ANO8Q9HCE9 1232 aaPredicted RBP1.93□□□□□ -2.1
RNU6-258P-201ENST00000390884 CD44P16070 742 aaKnown RBP1.92□□□□□ -2.1
RNU6-258P-201ENST00000390884 Q6ZNB5 142 aa1.92□□□□□ -2.1
RNU6-258P-201ENST00000390884 KRTAP1-3Q8IUG1 177 aa1.92□□□□□ -2.1
RNU6-258P-201ENST00000390884 METRNQ9UJH8 293 aa1.92□□□□□ -2.1
RNU6-258P-201ENST00000390884 PLA2G2EQ9NZK7 142 aa1.91□□□□□ -2.1
RNU6-258P-201ENST00000390884 U3KPZ7 1027 aaPredicted RBP1.91□□□□□ -2.1
RNU6-258P-201ENST00000390884 POTEJP0CG39 1038 aa1.89□□□□□ -2.11
RNU6-258P-201ENST00000390884 C7P10643 843 aa1.89□□□□□ -2.11
RNU6-258P-201ENST00000390884 SLC39A7Q92504 469 aa1.89□□□□□ -2.11
RNU6-258P-201ENST00000390884 MYT1LQ9UL68 1186 aa1.89□□□□□ -2.11
RNU6-258P-201ENST00000390884 KRTAP4-8Q9BYQ9 185 aa1.88□□□□□ -2.11
RNU6-258P-201ENST00000390884 MARVELD3Q96A59 401 aa1.86□□□□□ -2.11
RNU6-258P-201ENST00000390884 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.85□□□□□ -2.11
RNU6-258P-201ENST00000390884 PSMG3-AS1Q96PY0 264 aa1.85□□□□□ -2.11
RNU6-258P-201ENST00000390884 KRTAP3-3Q9BYR6 98 aa1.85□□□□□ -2.11
RNU6-258P-201ENST00000390884 KRTAP3-2Q9BYR7 98 aa1.85□□□□□ -2.11
RNU6-258P-201ENST00000390884 KRTAP9-6A0A140TA67 174 aa1.84□□□□□ -2.11
RNU6-258P-201ENST00000390884 RGS20O76081 388 aa1.84□□□□□ -2.11
RNU6-258P-201ENST00000390884 KRTAP9-2Q9BYQ4 174 aa1.84□□□□□ -2.11
RNU6-258P-201ENST00000390884 SNPHO15079 494 aa1.83□□□□□ -2.12
RNU6-258P-201ENST00000390884 EMP3P54852 163 aa1.83□□□□□ -2.12
RNU6-258P-201ENST00000390884 KRTAP9-8Q9BYQ0 159 aa1.83□□□□□ -2.12
RNU6-258P-201ENST00000390884 STK17AQ9UEE5 414 aa1.83□□□□□ -2.12
RNU6-258P-201ENST00000390884 CLEC11AQ9Y240 323 aa1.83□□□□□ -2.12
RNU6-258P-201ENST00000390884 GALR2O43603 387 aaPredicted RBP1.82□□□□□ -2.12
RNU6-258P-201ENST00000390884 LCE3BQ5TA77 95 aa1.82□□□□□ -2.12
RNU6-258P-201ENST00000390884 SLAIN1Q8ND83 568 aa1.82□□□□□ -2.12
RNU6-258P-201ENST00000390884 KRTAP4-8A0A0G2JLE6 195 aa1.81□□□□□ -2.12
RNU6-258P-201ENST00000390884 PELP1Q8IZL8 1130 aaKnown RBP1.81□□□□□ -2.12
RNU6-258P-201ENST00000390884 ZNF579Q8NAF0 562 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms