RNA–Protein interactions for RNA: ENST00000387069.1

RNU11-201, Transcript of RNA, U11 small nuclear, humanhuman

BASIC

Gene RNU11, Length 134 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-201ENST00000387069 NISCHQ9Y2I1 1504 aa10.49□□□□□ -0.73
RNU11-201ENST00000387069 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
RNU11-201ENST00000387069 MYT1Q01538 1121 aa10.27□□□□□ -0.77
RNU11-201ENST00000387069 HRCP23327 699 aa9.94□□□□□ -0.82
RNU11-201ENST00000387069 TTBK1Q5TCY1 1321 aaPredicted RBP9.8□□□□□ -0.84
RNU11-201ENST00000387069 ZEB1P37275 1124 aaPredicted RBP9.57□□□□□ -0.88
RNU11-201ENST00000387069 DCAF1Q9Y4B6 1507 aa9.56□□□□□ -0.88
RNU11-201ENST00000387069 CCDC180Q9P1Z9 1646 aa9.54□□□□□ -0.88
RNU11-201ENST00000387069 PCGF6Q9BYE7 350 aa9.38□□□□□ -0.91
RNU11-201ENST00000387069 SCAF1Q9H7N4 1312 aaKnown RBP9.36□□□□□ -0.91
RNU11-201ENST00000387069 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
RNU11-201ENST00000387069 TRIM26Q12899 539 aaPredicted RBP9.31□□□□□ -0.92
RNU11-201ENST00000387069 PPARGC1BQ86YN6 1023 aaKnown RBP9.29□□□□□ -0.92
RNU11-201ENST00000387069 CENPBP07199 599 aaPredicted RBP9.28□□□□□ -0.92
RNU11-201ENST00000387069 ACIN1Q9UKV3 1341 aaKnown RBP9.24□□□□□ -0.93
RNU11-201ENST00000387069 CHIC1Q5VXU3 224 aa9.2□□□□□ -0.94
RNU11-201ENST00000387069 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
RNU11-201ENST00000387069 SUPT5HO00267 1087 aaKnown RBP9.07□□□□□ -0.96
RNU11-201ENST00000387069 ERICH6Q7L0X2 663 aa9.06□□□□□ -0.96
RNU11-201ENST00000387069 GTF3C3Q9Y5Q9 886 aa9.04□□□□□ -0.96
RNU11-201ENST00000387069 ZCCHC6Q5VYS8 1495 aaKnown RBP9.02□□□□□ -0.97
RNU11-201ENST00000387069 NEUROD1Q13562 356 aa9.01□□□□□ -0.97
RNU11-201ENST00000387069 BCL11AQ9H165 835 aa8.96□□□□□ -0.98
RNU11-201ENST00000387069 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
RNU11-201ENST00000387069 ANP32EQ9BTT0 268 aa8.92□□□□□ -0.98
RNU11-201ENST00000387069 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.98
RNU11-201ENST00000387069 MYT1LQ9UL68 1186 aa8.84□□□□□ -0.99
RNU11-201ENST00000387069 TRIM41Q8WV44 630 aa8.79□□□□□ -1
RNU11-201ENST00000387069 APLP2Q06481 763 aa8.78□□□□□ -1
RNU11-201ENST00000387069 PRKCSHP14314 528 aaPredicted RBP8.77□□□□□ -1.01
RNU11-201ENST00000387069 FAM9AQ8IZU1 332 aaPredicted RBP8.76□□□□□ -1.01
RNU11-201ENST00000387069 LOC105371045A0A1W2PR82 267 aa8.75□□□□□ -1.01
RNU11-201ENST00000387069 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
RNU11-201ENST00000387069 CCER1Q8TC90 406 aaPredicted RBP8.75□□□□□ -1.01
RNU11-201ENST00000387069 ABCC9O60706 1549 aa8.66□□□□□ -1.02
RNU11-201ENST00000387069 WRNQ14191 1432 aaPredicted RBP eCLIP8.66□□□□□ -1.02
RNU11-201ENST00000387069 ERICH6BQ5W0A0 696 aa8.62□□□□□ -1.03
RNU11-201ENST00000387069 TSHZ2Q9NRE2 1034 aa8.62□□□□□ -1.03
RNU11-201ENST00000387069 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
RNU11-201ENST00000387069 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
RNU11-201ENST00000387069 RB1CC1Q8TDY2 1594 aa8.58□□□□□ -1.04
RNU11-201ENST00000387069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.56□□□□□ -1.04
RNU11-201ENST00000387069 MIER1Q8N108 512 aa8.52□□□□□ -1.05
RNU11-201ENST00000387069 YTHDC1Q96MU7 727 aaKnown RBP8.52□□□□□ -1.05
RNU11-201ENST00000387069 FANCIQ9NVI1 1328 aa8.51□□□□□ -1.05
RNU11-201ENST00000387069 NEFLP07196 543 aa8.46□□□□□ -1.06
RNU11-201ENST00000387069 EEA1Q15075 1411 aa8.46□□□□□ -1.06
RNU11-201ENST00000387069 RBM19Q9Y4C8 960 aaKnown RBP8.42□□□□□ -1.06
RNU11-201ENST00000387069 UBE2Q2Q8WVN8 375 aa8.41□□□□□ -1.06
RNU11-201ENST00000387069 RSF1Q96T23 1441 aaPredicted RBP8.4□□□□□ -1.06
RNU11-201ENST00000387069 TNIKQ9UKE5 1360 aa8.39□□□□□ -1.07
RNU11-201ENST00000387069 CEP162Q5TB80 1403 aa8.37□□□□□ -1.07
RNU11-201ENST00000387069 DEKP35659 375 aaKnown RBP8.33□□□□□ -1.08
RNU11-201ENST00000387069 CDK11AQ9UQ88 783 aaPredicted RBP8.33□□□□□ -1.08
RNU11-201ENST00000387069 EIF4G1Q04637 1599 aaKnown RBP8.32□□□□□ -1.08
RNU11-201ENST00000387069 GOLGA3Q08378 1498 aa8.28□□□□□ -1.08
RNU11-201ENST00000387069 CCER2I3L3R5 266 aa8.28□□□□□ -1.08
RNU11-201ENST00000387069 FKBP8Q14318 412 aa8.28□□□□□ -1.08
RNU11-201ENST00000387069 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
RNU11-201ENST00000387069 RTL5Q5HYW3 569 aaPredicted RBP8.26□□□□□ -1.09
RNU11-201ENST00000387069 KIF21BO75037 1637 aa8.25□□□□□ -1.09
RNU11-201ENST00000387069 CUX2O14529 1486 aa8.25□□□□□ -1.09
RNU11-201ENST00000387069 MSH5O43196 834 aa8.24□□□□□ -1.09
RNU11-201ENST00000387069 GLIPR1L2Q4G1C9 344 aa8.24□□□□□ -1.09
RNU11-201ENST00000387069 BAZ1BQ9UIG0 1483 aaKnown RBP8.24□□□□□ -1.09
RNU11-201ENST00000387069 USP35Q9P2H5 1018 aa8.23□□□□□ -1.09
RNU11-201ENST00000387069 SLC24A1O60721 1099 aa8.22□□□□□ -1.09
RNU11-201ENST00000387069 EIF5BO60841 1220 aaKnown RBP8.22□□□□□ -1.09
RNU11-201ENST00000387069 VPS8Q8N3P4 1428 aa8.21□□□□□ -1.09
RNU11-201ENST00000387069 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.09
RNU11-201ENST00000387069 DAXXQ9UER7 740 aaPredicted RBP8.21□□□□□ -1.1
RNU11-201ENST00000387069 NOP58Q9Y2X3 529 aaKnown RBP8.21□□□□□ -1.1
RNU11-201ENST00000387069 DHX57Q6P158 1386 aaKnown RBP8.21□□□□□ -1.1
RNU11-201ENST00000387069 C11orf95C9JLR9 678 aaPredicted RBP8.2□□□□□ -1.1
RNU11-201ENST00000387069 ANO8Q9HCE9 1232 aaPredicted RBP8.2□□□□□ -1.1
RNU11-201ENST00000387069 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
RNU11-201ENST00000387069 PPP4R2Q9NY27 417 aa8.16□□□□□ -1.1
RNU11-201ENST00000387069 DCAF8L2P0C7V8 631 aa8.15□□□□□ -1.1
RNU11-201ENST00000387069 ANP32AP39687 249 aaKnown RBP8.15□□□□□ -1.1
RNU11-201ENST00000387069 BCANQ96GW7 911 aa8.15□□□□□ -1.1
RNU11-201ENST00000387069 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
RNU11-201ENST00000387069 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
RNU11-201ENST00000387069 NACADO15069 1562 aa8.14□□□□□ -1.11
RNU11-201ENST00000387069 ANP32CO43423 234 aa8.13□□□□□ -1.11
RNU11-201ENST00000387069 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
RNU11-201ENST00000387069 PKNOX2Q96KN3 472 aa8.12□□□□□ -1.11
RNU11-201ENST00000387069 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
RNU11-201ENST00000387069 SCRIBQ14160 1630 aa8.11□□□□□ -1.11
RNU11-201ENST00000387069 WASHC2AQ641Q2 1341 aa8.11□□□□□ -1.11
RNU11-201ENST00000387069 CCDC136Q96JN2 1154 aa8.11□□□□□ -1.11
RNU11-201ENST00000387069 TOP2AP11388 1531 aaKnown RBP8.11□□□□□ -1.11
RNU11-201ENST00000387069 CLIP1P30622 1438 aa8.11□□□□□ -1.11
RNU11-201ENST00000387069 PPM1GO15355 546 aaPredicted RBP8.1□□□□□ -1.11
RNU11-201ENST00000387069 HNRNPUL2Q1KMD3 747 aaKnown RBP8.1□□□□□ -1.11
RNU11-201ENST00000387069 WASHC2CQ9Y4E1 1318 aa8.09□□□□□ -1.11
RNU11-201ENST00000387069 IPO9Q96P70 1041 aaKnown RBP8.09□□□□□ -1.11
RNU11-201ENST00000387069 WIZO95785 1651 aa8.08□□□□□ -1.12
RNU11-201ENST00000387069 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
RNU11-201ENST00000387069 ABCC8Q09428 1581 aa8.07□□□□□ -1.12
RNU11-201ENST00000387069 UBTFP17480 764 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms