RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	CHIC1	Q5VXU3	224 aa		5.6	□□□□□ -1.51
CACNB4-238	ENST00000636901	AEBP2	Q6ZN18	517 aa	Predicted RBP	5.28	□□□□□ -1.56
CACNB4-238	ENST00000636901	SENP3	Q9H4L4	574 aa	Predicted RBP	4.83	□□□□□ -1.64
CACNB4-238	ENST00000636901	NISCH	Q9Y2I1	1504 aa		4.78	□□□□□ -1.64
CACNB4-238	ENST00000636901	PHF23	Q9BUL5	403 aa	Predicted RBP	4.71	□□□□□ -1.66
CACNB4-238	ENST00000636901	PLPPR3	Q6T4P5	718 aa		4.67	□□□□□ -1.66
CACNB4-238	ENST00000636901	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.65	□□□□□ -1.66
CACNB4-238	ENST00000636901	DCAF8L2	P0C7V8	631 aa		4.58	□□□□□ -1.68
CACNB4-238	ENST00000636901	GON4L	Q3T8J9	2241 aa		4.47	□□□□□ -1.69
CACNB4-238	ENST00000636901	DNAJC5B	Q9UF47	199 aa		4.46	□□□□□ -1.7
CACNB4-238	ENST00000636901	NCBP3	Q53F19	620 aa	Known RBP	4.45	□□□□□ -1.7
CACNB4-238	ENST00000636901	PELP1	Q8IZL8	1130 aa	Known RBP	4.43	□□□□□ -1.7
CACNB4-238	ENST00000636901	KAT6B	Q8WYB5	2073 aa		4.42	□□□□□ -1.7
CACNB4-238	ENST00000636901	SCAF1	Q9H7N4	1312 aa	Known RBP	4.42	□□□□□ -1.7
CACNB4-238	ENST00000636901	MYT1L	Q9UL68	1186 aa		4.26	□□□□□ -1.73
CACNB4-238	ENST00000636901	APLP2	Q06481	763 aa		4.24	□□□□□ -1.73
CACNB4-238	ENST00000636901	ERICH6	Q7L0X2	663 aa		4.24	□□□□□ -1.73
CACNB4-238	ENST00000636901	ATRX	P46100	2492 aa		4.23	□□□□□ -1.73
CACNB4-238	ENST00000636901	MYT1	Q01538	1121 aa		4.21	□□□□□ -1.74
CACNB4-238	ENST00000636901	FOXD1	Q16676	465 aa		4.19	□□□□□ -1.74
CACNB4-238	ENST00000636901	ABCC9	O60706	1549 aa		4.19	□□□□□ -1.74
CACNB4-238	ENST00000636901	CCER1	Q8TC90	406 aa	Predicted RBP	4.16	□□□□□ -1.74
CACNB4-238	ENST00000636901	GOLGA4	Q13439	2230 aa	Known RBP	4.16	□□□□□ -1.74
CACNB4-238	ENST00000636901	SLC24A1	O60721	1099 aa		4.16	□□□□□ -1.74
CACNB4-238	ENST00000636901	KRI1	Q8N9T8	703 aa	Known RBP	4.15	□□□□□ -1.74
CACNB4-238	ENST00000636901	SLC4A1AP	Q9BWU0	796 aa	Known RBP	4.15	□□□□□ -1.75
CACNB4-238	ENST00000636901	NPM1	P06748	294 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
CACNB4-238	ENST00000636901	EHMT2	Q96KQ7	1210 aa		4.14	□□□□□ -1.75
CACNB4-238	ENST00000636901	MSH5	O43196	834 aa		4.14	□□□□□ -1.75
CACNB4-238	ENST00000636901	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.13	□□□□□ -1.75
CACNB4-238	ENST00000636901	DAXX	Q9UER7	740 aa	Predicted RBP	4.11	□□□□□ -1.75
CACNB4-238	ENST00000636901	RB1CC1	Q8TDY2	1594 aa		4.11	□□□□□ -1.75
CACNB4-238	ENST00000636901	PABPN1	Q86U42	306 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CACNB4-238	ENST00000636901	ARID1A	O14497	2285 aa		4.07	□□□□□ -1.76
CACNB4-238	ENST00000636901	PLEKHG5	O94827	1062 aa		4.06	□□□□□ -1.76
CACNB4-238	ENST00000636901	PIAS4	Q8N2W9	510 aa	Predicted RBP	4.06	□□□□□ -1.76
CACNB4-238	ENST00000636901		A0A0G2JS52	829 aa		4.06	□□□□□ -1.76
CACNB4-238	ENST00000636901	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	4.06	□□□□□ -1.76
CACNB4-238	ENST00000636901	HNRNPUL2	Q1KMD3	747 aa	Known RBP	4.06	□□□□□ -1.76
CACNB4-238	ENST00000636901	ESF1	Q9H501	851 aa	Known RBP	4.05	□□□□□ -1.76
CACNB4-238	ENST00000636901	DIDO1	Q9BTC0	2240 aa	Known RBP	4.04	□□□□□ -1.76
CACNB4-238	ENST00000636901	CDK11B	P21127	795 aa	Known RBP	4.04	□□□□□ -1.76
CACNB4-238	ENST00000636901	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.04	□□□□□ -1.76
CACNB4-238	ENST00000636901	DCAF8L1	A6NGE4	600 aa		4.04	□□□□□ -1.76
CACNB4-238	ENST00000636901	CCDC180	Q9P1Z9	1646 aa		4.04	□□□□□ -1.76
CACNB4-238	ENST00000636901	POLE	Q07864	2286 aa		4.03	□□□□□ -1.76
CACNB4-238	ENST00000636901	YTHDC1	Q96MU7	727 aa	Known RBP	4.03	□□□□□ -1.76
CACNB4-238	ENST00000636901	NACAD	O15069	1562 aa		4.03	□□□□□ -1.76
CACNB4-238	ENST00000636901	BCAN	Q96GW7	911 aa		4.03	□□□□□ -1.77
CACNB4-238	ENST00000636901	TULP1	O00294	542 aa	Predicted RBP	4.02	□□□□□ -1.77
CACNB4-238	ENST00000636901	BCL11A	Q9H165	835 aa		4.02	□□□□□ -1.77
CACNB4-238	ENST00000636901	ERCC6	Q03468	1493 aa		4.02	□□□□□ -1.77
CACNB4-238	ENST00000636901	TTBK1	Q5TCY1	1321 aa	Predicted RBP	4.02	□□□□□ -1.77
CACNB4-238	ENST00000636901	CNKSR2	Q8WXI2	1034 aa		4.01	□□□□□ -1.77
CACNB4-238	ENST00000636901	BAZ2B	Q9UIF8	2168 aa	Known RBP	4.01	□□□□□ -1.77
CACNB4-238	ENST00000636901	PRM3	Q9NNZ6	103 aa		4	□□□□□ -1.77
CACNB4-238	ENST00000636901	SHROOM4	Q9ULL8	1493 aa		4	□□□□□ -1.77
CACNB4-238	ENST00000636901	POLR3GL	Q9BT43	218 aa		3.99	□□□□□ -1.77
CACNB4-238	ENST00000636901	RANGAP1	P46060	587 aa	Predicted RBP	3.98	□□□□□ -1.77
CACNB4-238	ENST00000636901	ZBTB47	Q9UFB7	747 aa	Predicted RBP	3.98	□□□□□ -1.77
CACNB4-238	ENST00000636901	TRIM26	Q12899	539 aa	Predicted RBP	3.98	□□□□□ -1.77
CACNB4-238	ENST00000636901	CLSPN	Q9HAW4	1339 aa		3.97	□□□□□ -1.77
CACNB4-238	ENST00000636901	CHMP7	Q8WUX9	453 aa	Predicted RBP	3.97	□□□□□ -1.77
CACNB4-238	ENST00000636901	PPP6R1	Q9UPN7	881 aa		3.97	□□□□□ -1.77
CACNB4-238	ENST00000636901	CNTRL	Q7Z7A1	2325 aa		3.96	□□□□□ -1.77
CACNB4-238	ENST00000636901	PPP4R3CP	Q6ZMV5	832 aa		3.96	□□□□□ -1.78
CACNB4-238	ENST00000636901	TRH	P20396	242 aa	Predicted RBP	3.96	□□□□□ -1.78
CACNB4-238	ENST00000636901	ATXN8OS	P0DMR3	200 aa		3.95	□□□□□ -1.78
CACNB4-238	ENST00000636901	RNF216	Q9NWF9	866 aa	Predicted RBP	3.95	□□□□□ -1.78
CACNB4-238	ENST00000636901	CNGB1	Q14028	1251 aa	Predicted RBP	3.95	□□□□□ -1.78
CACNB4-238	ENST00000636901	ADRA2B	P18089	450 aa		3.94	□□□□□ -1.78
CACNB4-238	ENST00000636901	FBLN2	P98095	1184 aa		3.93	□□□□□ -1.78
CACNB4-238	ENST00000636901	KNTC1	P50748	2209 aa		3.93	□□□□□ -1.78
CACNB4-238	ENST00000636901	ZNF318	Q5VUA4	2279 aa		3.93	□□□□□ -1.78
CACNB4-238	ENST00000636901	NEFL	P07196	543 aa		3.92	□□□□□ -1.78
CACNB4-238	ENST00000636901	PDS5B	Q9NTI5	1447 aa		3.92	□□□□□ -1.78
CACNB4-238	ENST00000636901	NPM2	Q86SE8	214 aa	Known RBP	3.92	□□□□□ -1.78
CACNB4-238	ENST00000636901	FKBP8	Q14318	412 aa		3.92	□□□□□ -1.78
CACNB4-238	ENST00000636901	MICAL3	Q7RTP6	2002 aa		3.92	□□□□□ -1.78
CACNB4-238	ENST00000636901	TAOK2	Q9UL54	1235 aa		3.92	□□□□□ -1.78
CACNB4-238	ENST00000636901	HOXD11	P31277	338 aa	Predicted RBP	3.91	□□□□□ -1.78
CACNB4-238	ENST00000636901	MYO9B	Q13459	2157 aa		3.91	□□□□□ -1.78
CACNB4-238	ENST00000636901	ZNF316	A6NFI3	1004 aa	Predicted RBP	3.91	□□□□□ -1.78
CACNB4-238	ENST00000636901	FBXO3	Q9UK99	471 aa		3.9	□□□□□ -1.79
CACNB4-238	ENST00000636901	ICE1	Q9Y2F5	2266 aa		3.9	□□□□□ -1.79
CACNB4-238	ENST00000636901	AMER1	Q5JTC6	1135 aa	Predicted RBP	3.9	□□□□□ -1.79
CACNB4-238	ENST00000636901	NPHP1	O15259	732 aa		3.89	□□□□□ -1.79
CACNB4-238	ENST00000636901	OSCAR	Q8IYS5	282 aa		3.89	□□□□□ -1.79
CACNB4-238	ENST00000636901	URB1	O60287	2271 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-238	ENST00000636901	PRRC2B	Q5JSZ5	2229 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-238	ENST00000636901	HMGB2	P26583	209 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-238	ENST00000636901	TRIM41	Q8WV44	630 aa		3.87	□□□□□ -1.79
CACNB4-238	ENST00000636901	MYO15B	Q96JP2	1530 aa		3.87	□□□□□ -1.79
CACNB4-238	ENST00000636901	NEFM	P07197	916 aa		3.87	□□□□□ -1.79
CACNB4-238	ENST00000636901	CECR2	Q9BXF3	1484 aa		3.86	□□□□□ -1.79
CACNB4-238	ENST00000636901	DMRT2	Q9Y5R5	561 aa		3.86	□□□□□ -1.79
CACNB4-238	ENST00000636901	CLSTN1	O94985	981 aa		3.86	□□□□□ -1.79
CACNB4-238	ENST00000636901	SAMD1	Q6SPF0	538 aa	Predicted RBP	3.86	□□□□□ -1.79
CACNB4-238	ENST00000636901	ACIN1	Q9UKV3	1341 aa	Known RBP	3.86	□□□□□ -1.79
CACNB4-238	ENST00000636901	ANKRD12	Q6UB98	2062 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms