Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.3■■□□□ 1
HDAC6Q9UBN7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.3■■□□□ 1
HDAC6Q9UBN7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.3■■□□□ 1
HDAC6Q9UBN7 AL121956.5-201ENST00000625261 221 ntBASIC21.3■■□□□ 1
HDAC6Q9UBN7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.3■■□□□ 1
HDAC6Q9UBN7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.3■■□□□ 1
HDAC6Q9UBN7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.3■■□□□ 1
HDAC6Q9UBN7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.3■■□□□ 1
HDAC6Q9UBN7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.3■■□□□ 1
HDAC6Q9UBN7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC6Q9UBN7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HDAC6Q9UBN7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.29■■□□□ 1
HDAC6Q9UBN7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 PCED1CP-201ENST00000419887 785 ntBASIC21.29■■□□□ 1
HDAC6Q9UBN7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 KRT18P38-201ENST00000449496 1282 ntBASIC21.29■■□□□ 1
HDAC6Q9UBN7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 PRSS44-201ENST00000515154 1146 ntBASIC21.29■■□□□ 1
HDAC6Q9UBN7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.29■■□□□ 1
HDAC6Q9UBN7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDAC6Q9UBN7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 AL671277.2-201ENST00000458060 996 ntBASIC21.28■■□□□ 1
HDAC6Q9UBN7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.28■■□□□ 1
HDAC6Q9UBN7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.28■■□□□ 1
HDAC6Q9UBN7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 AC008622.2-201ENST00000617006 1229 ntBASIC21.27■■□□□ 1
HDAC6Q9UBN7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HDAC6Q9UBN7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.27■■□□□ 1
HDAC6Q9UBN7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
HDAC6Q9UBN7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.27■□□□□ 0.99
HDAC6Q9UBN7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HDAC6Q9UBN7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
HDAC6Q9UBN7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.27■□□□□ 0.99
HDAC6Q9UBN7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HDAC6Q9UBN7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.26■□□□□ 0.99
HDAC6Q9UBN7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms