Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 AL450487.1-201ENST00000426799 995 ntBASIC19.45■□□□□ 0.7
VPS45Q9NRW7 TSPY21P-201ENST00000433481 731 ntBASIC19.45■□□□□ 0.7
VPS45Q9NRW7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 AC130371.2-201ENST00000619443 611 ntBASIC19.45■□□□□ 0.7
VPS45Q9NRW7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS45Q9NRW7 IER3-202ENST00000376377 1350 ntBASIC19.44■□□□□ 0.7
VPS45Q9NRW7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 SLC25A1P2-201ENST00000430693 912 ntBASIC19.44■□□□□ 0.7
VPS45Q9NRW7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 DUSP5P1-201ENST00000441325 1139 ntBASIC19.44■□□□□ 0.7
VPS45Q9NRW7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 AC010653.2-201ENST00000623505 997 ntBASIC19.44■□□□□ 0.7
VPS45Q9NRW7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VPS45Q9NRW7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 Z85996.1-201ENST00000494644 937 ntBASIC19.43■□□□□ 0.7
VPS45Q9NRW7 FAM86EP-206ENST00000510506 987 ntBASIC19.43■□□□□ 0.7
VPS45Q9NRW7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS45Q9NRW7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 KRT8P41-201ENST00000533985 1514 ntBASIC19.42■□□□□ 0.7
VPS45Q9NRW7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 AIRN-201ENST00000601203 4374 ntBASIC19.42■□□□□ 0.7
VPS45Q9NRW7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS45Q9NRW7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms