Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
SMCO4Q9NRQ5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMCO4Q9NRQ5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMCO4Q9NRQ5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.83□□□□□ -0.03
SMCO4Q9NRQ5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMCO4Q9NRQ5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMCO4Q9NRQ5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 MIR7108-201ENST00000614319 87 ntBASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 PCDHB19P-201ENST00000570871 2371 ntBASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.83□□□□□ -0.04
SMCO4Q9NRQ5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMCO4Q9NRQ5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 PCDHA1-201ENST00000378133 2726 ntBASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms