Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HDHD3Q9BSH5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 TSPY21P-201ENST00000433481 731 ntBASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.93■□□□□ 0.14
HDHD3Q9BSH5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 UNC93B4-201ENST00000505679 747 ntBASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 AL160286.2-201ENST00000567150 934 ntBASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 AC068880.1-201ENST00000507289 2297 ntBASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 AC090340.1-201ENST00000620778 4980 ntBASIC15.92■□□□□ 0.14
HDHD3Q9BSH5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 AC069152.1-201ENST00000438030 544 ntBASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 AL109923.1-201ENST00000618799 583 ntBASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HDHD3Q9BSH5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms