Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NECTIN4Q96NY8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.52■□□□□ 0.71
NECTIN4Q96NY8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 AL109659.2-201ENST00000606809 1674 ntBASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 HLA-A-201ENST00000376802 1334 ntBASIC19.51■□□□□ 0.71
NECTIN4Q96NY8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 PMS2P1-201ENST00000431037 1228 ntBASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 VENTXP7-201ENST00000475503 772 ntBASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 SDHAP1-207ENST00000440850 2000 ntBASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 LINC00167-201ENST00000530583 1419 ntBASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NECTIN4Q96NY8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 AL590627.1-203ENST00000421194 1026 ntBASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 SAPCD2P3-201ENST00000455031 850 ntBASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NECTIN4Q96NY8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 GPR32P1-201ENST00000601788 811 ntBASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NECTIN4Q96NY8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms