Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.42■□□□□ 0.7
C9orf72Q96LT7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 KRT18P16-201ENST00000510337 1294 ntBASIC19.41■□□□□ 0.7
C9orf72Q96LT7 AC008550.1-201ENST00000511500 884 ntBASIC19.41■□□□□ 0.7
C9orf72Q96LT7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
C9orf72Q96LT7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 MTDHP1-201ENST00000605323 784 ntBASIC19.4■□□□□ 0.7
C9orf72Q96LT7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 NOC2LP1-202ENST00000452600 2235 ntBASIC19.4■□□□□ 0.7
C9orf72Q96LT7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C9orf72Q96LT7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
C9orf72Q96LT7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
C9orf72Q96LT7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
C9orf72Q96LT7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.39■□□□□ 0.7
C9orf72Q96LT7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
C9orf72Q96LT7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 PCDHB18P-201ENST00000524813 2368 ntBASIC19.39■□□□□ 0.69
C9orf72Q96LT7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.39■□□□□ 0.69
C9orf72Q96LT7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms