Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 AC126763.1-201ENST00000552015 2118 ntBASIC19.24■□□□□ 0.67
RTP4Q96DX8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 MESTP1-201ENST00000404287 994 ntBASIC19.24■□□□□ 0.67
RTP4Q96DX8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 AC011506.1-201ENST00000474329 610 ntBASIC19.24■□□□□ 0.67
RTP4Q96DX8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 AC073912.3-201ENST00000624414 853 ntBASIC19.24■□□□□ 0.67
RTP4Q96DX8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 AL390961.4-201ENST00000623958 2535 ntBASIC19.24■□□□□ 0.67
RTP4Q96DX8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTP4Q96DX8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.24■□□□□ 0.67
RTP4Q96DX8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.23■□□□□ 0.67
RTP4Q96DX8 B3GAT3P1-201ENST00000471720 806 ntBASIC19.23■□□□□ 0.67
RTP4Q96DX8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTP4Q96DX8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.23■□□□□ 0.67
RTP4Q96DX8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 MIR6786-201ENST00000616843 113 ntBASIC19.22■□□□□ 0.67
RTP4Q96DX8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTP4Q96DX8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.22■□□□□ 0.67
RTP4Q96DX8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTP4Q96DX8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.21■□□□□ 0.67
RTP4Q96DX8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms