Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3KBP1Q96B97 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.67■□□□□ 0.58
SH3KBP1Q96B97 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3KBP1Q96B97 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3KBP1Q96B97 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SH3KBP1Q96B97 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.67■□□□□ 0.58
SH3KBP1Q96B97 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 KRT8P41-201ENST00000533985 1514 ntBASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 TERF1P1-201ENST00000311003 1181 ntBASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 TSPY17P-201ENST00000450329 467 ntBASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 AC010653.2-201ENST00000623505 997 ntBASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SH3KBP1Q96B97 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 Z82202.1-201ENST00000623446 1880 ntBASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 HMGA1P5-201ENST00000412453 271 ntBASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 ECEL1P2-202ENST00000465689 757 ntBASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 PRSS44-201ENST00000515154 1146 ntBASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 CKBP1-201ENST00000565489 1086 ntBASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 AP000974.1-201ENST00000623909 2387 ntBASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.65■□□□□ 0.58
SH3KBP1Q96B97 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SH3KBP1Q96B97 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SH3KBP1Q96B97 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 SDHAP1-207ENST00000440850 2000 ntBASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3KBP1Q96B97 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 AL049597.2-201ENST00000565575 961 ntBASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 AL512604.3-201ENST00000569583 964 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms