Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RAB40AQ8WXH6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 ABALON-201ENST00000629058 1903 ntBASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB40AQ8WXH6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 C1QBPP2-201ENST00000528754 825 ntBASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 AL359736.2-201ENST00000621992 437 ntBASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 FAM197Y4-202ENST00000622692 608 ntBASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RAB40AQ8WXH6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 UBE2SP1-201ENST00000450587 669 ntBASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 RPPH1-201ENST00000516869 333 ntBASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 AC233263.1-201ENST00000578059 224 ntBASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB40AQ8WXH6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms