Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 AC005082.1-201ENST00000413042 2259 ntBASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 AC011506.1-201ENST00000474329 610 ntBASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 FITM1-202ENST00000559294 800 ntBASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 AC007613.1-201ENST00000572811 2597 ntBASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CFAP221Q4G0U5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 AC133561.5-201ENST00000635547 218 ntBASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 AC006333.2-201ENST00000607957 2099 ntBASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CFAP221Q4G0U5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 RCC2P6-201ENST00000526625 1557 ntBASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 AC130371.2-201ENST00000619443 611 ntBASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CFAP221Q4G0U5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.52■□□□□ 0.87
CFAP221Q4G0U5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CFAP221Q4G0U5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 MIR1238-201ENST00000408483 83 ntBASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 Z85996.1-201ENST00000494644 937 ntBASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP221Q4G0U5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms