Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.65■■□□□ 1.06
USH1GQ495M9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USH1GQ495M9 MIR3180-5-201ENST00000583743 153 ntBASIC21.65■■□□□ 1.06
USH1GQ495M9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.65■■□□□ 1.06
USH1GQ495M9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USH1GQ495M9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.65■■□□□ 1.06
USH1GQ495M9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USH1GQ495M9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USH1GQ495M9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USH1GQ495M9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
USH1GQ495M9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USH1GQ495M9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
USH1GQ495M9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.64■■□□□ 1.06
USH1GQ495M9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.64■■□□□ 1.05
USH1GQ495M9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 AC008556.1-201ENST00000610908 2040 ntBASIC21.64■■□□□ 1.05
USH1GQ495M9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.64■■□□□ 1.05
USH1GQ495M9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.64■■□□□ 1.05
USH1GQ495M9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.64■■□□□ 1.05
USH1GQ495M9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.64■■□□□ 1.05
USH1GQ495M9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
USH1GQ495M9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.64■■□□□ 1.05
USH1GQ495M9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
USH1GQ495M9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
USH1GQ495M9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.63■■□□□ 1.05
USH1GQ495M9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.63■■□□□ 1.05
USH1GQ495M9 AC116562.4-201ENST00000641316 2276 ntBASIC21.63■■□□□ 1.05
USH1GQ495M9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.63■■□□□ 1.05
USH1GQ495M9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.63■■□□□ 1.05
USH1GQ495M9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.63■■□□□ 1.05
USH1GQ495M9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.63■■□□□ 1.05
USH1GQ495M9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.63■■□□□ 1.05
USH1GQ495M9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 AC024243.1-201ENST00000609234 778 ntBASIC21.63■■□□□ 1.05
USH1GQ495M9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.63■■□□□ 1.05
USH1GQ495M9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
USH1GQ495M9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
USH1GQ495M9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.63■■□□□ 1.05
USH1GQ495M9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
USH1GQ495M9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
USH1GQ495M9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
USH1GQ495M9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.62■■□□□ 1.05
USH1GQ495M9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.62■■□□□ 1.05
USH1GQ495M9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.62■■□□□ 1.05
USH1GQ495M9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.62■■□□□ 1.05
USH1GQ495M9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.62■■□□□ 1.05
USH1GQ495M9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.62■■□□□ 1.05
USH1GQ495M9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.62■■□□□ 1.05
USH1GQ495M9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.62■■□□□ 1.05
USH1GQ495M9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.62■■□□□ 1.05
USH1GQ495M9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.62■■□□□ 1.05
USH1GQ495M9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
USH1GQ495M9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.62■■□□□ 1.05
USH1GQ495M9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.62■■□□□ 1.05
USH1GQ495M9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.62■■□□□ 1.05
USH1GQ495M9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
USH1GQ495M9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
USH1GQ495M9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
USH1GQ495M9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.61■■□□□ 1.05
USH1GQ495M9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.61■■□□□ 1.05
USH1GQ495M9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.61■■□□□ 1.05
USH1GQ495M9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.61■■□□□ 1.05
USH1GQ495M9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
USH1GQ495M9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms