Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 AC130371.2-201ENST00000619443 611 ntBASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 SDHAP1-207ENST00000440850 2000 ntBASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RASGEF1BQ0VAM2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 AL138781.2-201ENST00000617896 1843 ntBASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 MESTP1-201ENST00000404287 994 ntBASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 AC091390.4-202ENST00000476426 537 ntBASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RASGEF1BQ0VAM2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 KRT8P41-201ENST00000533985 1514 ntBASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 FAM207BP-201ENST00000447172 505 ntBASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 RBM17P1-201ENST00000453646 1190 ntBASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 DGCR10-201ENST00000609839 495 ntBASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RASGEF1BQ0VAM2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.11■□□□□ 0.33
RASGEF1BQ0VAM2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms